The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Identifying latent genetic interactions in genome-wide association studies using the Latent Interaction Testing (LIT) framework. LIT is a flexible kernel-based approach that leverages information across multiple traits to detect latent genetic interactions without specifying or observing the interacting variable (e.g., environment). LIT accepts standard PLINK files as inputs to analyze large genome-wide association studies.
| Version: | 1.0.0 |
| Imports: | Rcpp (≥ 1.0.11), genio, CompQuadForm |
| LinkingTo: | Rcpp, RcppArmadillo, RcppEigen |
| Suggests: | testthat (≥ 3.0.0), knitr, rmarkdown |
| Published: | 2023-08-15 |
| DOI: | 10.32614/CRAN.package.lit |
| Author: | Andrew Bass [aut, cre], Michael Epstein [aut] |
| Maintainer: | Andrew Bass <ajbass at emory.edu> |
| License: | LGPL-2 | LGPL-2.1 | LGPL-3 [expanded from: LGPL] |
| URL: | https://github.com/ajbass/lit |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| CRAN checks: | lit results |
| Reference manual: | lit.pdf |
| Vignettes: |
LIT: Latent Interaction Testing |
| Package source: | lit_1.0.0.tar.gz |
| Windows binaries: | r-devel: lit_1.0.0.zip, r-release: lit_1.0.0.zip, r-oldrel: lit_1.0.0.zip |
| macOS binaries: | r-release (arm64): lit_1.0.0.tgz, r-oldrel (arm64): lit_1.0.0.tgz, r-release (x86_64): lit_1.0.0.tgz, r-oldrel (x86_64): lit_1.0.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=lit to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.