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gplots: Various R Programming Tools for Plotting Data

Various R programming tools for plotting data, including: - calculating and plotting locally smoothed summary function as ('bandplot', 'wapply'), - enhanced versions of standard plots ('barplot2', 'boxplot2', 'heatmap.2', 'smartlegend'), - manipulating colors ('col2hex', 'colorpanel', 'redgreen', 'greenred', 'bluered', 'redblue', 'rich.colors'), - calculating and plotting two-dimensional data summaries ('ci2d', 'hist2d'), - enhanced regression diagnostic plots ('lmplot2', 'residplot'), - formula-enabled interface to 'stats::lowess' function ('lowess'), - displaying textual data in plots ('textplot', 'sinkplot'), - plotting dots whose size reflects the relative magnitude of the elements ('balloonplot', 'bubbleplot'), - plotting "Venn" diagrams ('venn'), - displaying Open-Office style plots ('ooplot'), - plotting multiple data on same region, with separate axes ('overplot'), - plotting means and confidence intervals ('plotCI', 'plotmeans'), - spacing points in an x-y plot so they don't overlap ('space').

Version: 3.2.0
Depends: R (≥ 3.0)
Imports: gtools, stats, caTools, KernSmooth, methods
Suggests: grid, MASS, knitr, rmarkdown, r2d2, nlme
Published: 2024-10-05
DOI: 10.32614/CRAN.package.gplots
Author: Gregory R. Warnes [aut], Ben Bolker [aut], Lodewijk Bonebakker [aut], Robert Gentleman [aut], Wolfgang Huber [aut], Andy Liaw [aut], Thomas Lumley [aut], Martin Maechler [aut], Arni Magnusson [aut], Steffen Moeller [aut], Marc Schwartz [aut], Bill Venables [aut], Tal Galili [aut, cre]
Maintainer: Tal Galili <tal.galili at gmail.com>
BugReports: https://github.com/talgalili/gplots/issues
License: GPL-2
URL: https://github.com/talgalili/gplots, https://talgalili.github.io/gplots/
NeedsCompilation: no
Materials: README NEWS ChangeLog
CRAN checks: gplots results

Documentation:

Reference manual: gplots.pdf
Vignettes: Venn Diagrams with 'gplots' (source, R code)

Downloads:

Package source: gplots_3.2.0.tar.gz
Windows binaries: r-devel: gplots_3.2.0.zip, r-release: gplots_3.2.0.zip, r-oldrel: gplots_3.2.0.zip
macOS binaries: r-release (arm64): gplots_3.2.0.tgz, r-oldrel (arm64): gplots_3.2.0.tgz, r-release (x86_64): gplots_3.2.0.tgz, r-oldrel (x86_64): gplots_3.2.0.tgz
Old sources: gplots archive

Reverse dependencies:

Reverse depends: BayesianMediationA, bayess, cellVolumeDist, corkscrew, DandEFA, DensParcorr, difconet, EBSeq, GSCA, HD2013SGI, hdbma, Hiiragi2013, iCheck, made4, massiR, MBttest, MDplot, MetabolAnalyze, MethTargetedNGS, mgsa, mlma, mma, MOQA, NestLink, PRISMA, RCA, RnBeads, SCINA, swamp, switchBox, tRanslatome
Reverse imports: a4Base, affycoretools, artMS, ASSIGN, asymmetry, BAMMtools, bingat, boundingbox, BSPBSS, BUScorrect, BUSseq, CaDrA, cbaf, CellScore, ChIPseeker, CINdex, CJIVE, CluMSID, CNVPanelizer, CoFRA, CoGAPS, cogena, colordistance, compcodeR, compEpiTools, CoNI, consensus, corto, covid19.analytics, crmReg, crqa, cytoMEM, dar, debrowser, DepecheR, DeSousa2013, DiffBind, DmelSGI, DNMF, DPBBM, EGAD, EGSEA, ENmix, erccdashboard, FAMetA, fDMA, flagme, Fletcher2013a, FLLat, flowCyBar, flowDensity, fst4pg, fusedMGM, GDCRNATools, GeneOverlap, GOexpress, graphsim, HIREewas, HMP, ideal, indirect, iNETgrate, infercnv, ionr, isomiRs, kissDE, KSEAapp, les, LSDirf, M3Drop, MAIT, metaGE, MetaNeighbor, metaseqR2, methylPipe, MetProc, MicrobiomeSurv, MigConnectivity, miRLAB, MLP, MLZ, mmabig, mogsa, Moonlight2R, MoonlightR, msmsEDA, MSstats, MultBiplotR, MultiGroupO, multiUS, NCA, nearBynding, netZooR, omXplore, PAA, Path.Analysis, Patterns, phenoTest, piano, plotMCMC, polimetrics, poliscidata, proActiv, Prostar, r.jive, RAMClustR, RCDT, rcellminer, RcmdrPlugin.BiclustGUI, RCy3, rdi, ReactomeGSA, Repitools, rexposome, rgsepd, RITAN, RNAdecay, roastgsa, RobMixReg, ROCR, RPPanalyzer, rSRD, SAMtool, scMultiSim, scone, SCOPE, serieslcb, sesem, shinyepico, shinyMobile, signatureSurvival, sigQC, SingleCellSignalR, sRACIPE, STATegRa, STRINGdb, TFARM, tigre, TIMP, tmod, TopKLists, Trendy, TSCAN, uSORT, vannstats, variancePartition, vulcan, washeR, wilson, yarn
Reverse suggests: AgiMicroRna, airpart, BayesMultMeta, BioQC, ChemmineR, ChIPpeakAnno, clusternomics, cola, ComplexHeatmap, condvis, CTD, DAPAR, dartR, dartR.base, dartR.captive, dartR.popgen, dartR.spatial, dendextend, dendsort, enveomics.R, FRESA.CAD, gmodels, gtools, heatmaply, heplots, HistData, httk, InteractiveComplexHeatmap, interactiveDisplay, IPV, isobar, limma, Linnorm, MAnorm2, MCbiclust, metamicrobiomeR, MKmisc, MoBPS, MSnbase, multiClust, OmicsPLS, projectR, psichomics, PtH2O2lipids, QFeatures, r4ss, rattle, RcisTarget, RforProteomics, RMassBank, scPloidy, sensitivity, sim1000G, Single.mTEC.Transcriptomes, spatialHeatmap, survClust, TargetScore, TargetScoreData, timeOmics, TOAST, varrank
Reverse enhances: caroline

Linking:

Please use the canonical form https://CRAN.R-project.org/package=gplots to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.