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MoBPS: Modular Breeding Program Simulator

Framework for the simulation framework for the simulation of complex breeding programs and compare their economic and genetic impact. Associated publication: Pook et al. (2020) <doi:10.1534/g3.120.401193>.

Version: 1.13.1
Depends: R (≥ 3.0)
Imports: graphics, stats, utils
Suggests: EMMREML, BGLR, MASS, doMPI, doRNG, compiler, foreach, sommer, vcfR, jsonlite, rrBLUP, biomaRt, Matrix, doParallel, RColorBrewer, optiSel, alstructure, NAM, gplots, phylogram, cPCG, VariantAnnotation, GenomicRanges, IRanges, MatrixGenerics, Rsamtools, visPedigree, data.table, methods, genio
Enhances: miraculix (≥ 0.9.10), RandomFieldsUtils (≥ 0.5.9), MoBPSmaps
Published: 2025-10-29
DOI: 10.32614/CRAN.package.MoBPS
Author: Torsten Pook ORCID iD [aut, cre], Johannes Geibel ORCID iD [ctb], Azadeh Hassanpour ORCID iD [ctb], Tobias Niehoff ORCID iD [ctb]
Maintainer: Torsten Pook <torsten.pook at wur.nl>
License: GPL (≥ 3)
NeedsCompilation: no
SystemRequirements: MiXBLUP (optional; used for multi-trait genomic evaluations); blupf90-family (optional; used for multi-trait genomic evaluations)
Additional_repositories: https://tpook92.github.io/drat/
In views: Agriculture
CRAN checks: MoBPS results

Documentation:

Reference manual: MoBPS.html , MoBPS.pdf

Downloads:

Package source: MoBPS_1.13.1.tar.gz
Windows binaries: r-devel: MoBPS_1.13.1.zip, r-release: MoBPS_1.13.1.zip, r-oldrel: MoBPS_1.13.1.zip
macOS binaries: r-release (arm64): MoBPS_1.13.1.tgz, r-oldrel (arm64): MoBPS_1.13.1.tgz, r-release (x86_64): MoBPS_1.13.1.tgz, r-oldrel (x86_64): MoBPS_1.13.1.tgz
Old sources: MoBPS archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.