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Log-ratio Lasso regression for continuous, binary, and survival outcomes with compositional features. See Fei and others (2023) <doi:10.1101/2023.05.02.538599>.
Version: | 0.3.0 |
Depends: | R (≥ 3.5.0) |
Imports: | Rcpp (≥ 1.0.9), stats, survival, ggplot2, survcomp, reshape, dplyr, glmnet, caret, grDevices, utils, mvtnorm, doParallel, doRNG, foreach, msm |
LinkingTo: | Rcpp, RcppArmadillo, RcppProgress, ast2ast |
Suggests: | covr, knitr, rmarkdown, spelling, testthat (≥ 3.0.0), patchwork |
Published: | 2024-08-20 |
DOI: | 10.32614/CRAN.package.FLORAL |
Author: | Teng Fei |
Maintainer: | Teng Fei <feit1 at mskcc.org> |
BugReports: | https://github.com/vdblab/FLORAL/issues |
License: | GPL (≥ 3) |
URL: | https://vdblab.github.io/FLORAL/ |
NeedsCompilation: | yes |
SystemRequirements: | C++17 |
Language: | en-US |
Materials: | README NEWS |
CRAN checks: | FLORAL results |
Reference manual: | FLORAL.pdf |
Vignettes: |
Using FLORAL for Microbiome Analysis (source, R code) Using FLORAL for survival models with longitudinal microbiome data (source, R code) |
Package source: | FLORAL_0.3.0.tar.gz |
Windows binaries: | r-devel: FLORAL_0.3.0.zip, r-release: FLORAL_0.3.0.zip, r-oldrel: FLORAL_0.3.0.zip |
macOS binaries: | r-release (arm64): FLORAL_0.3.0.tgz, r-oldrel (arm64): FLORAL_0.3.0.tgz, r-release (x86_64): FLORAL_0.3.0.tgz, r-oldrel (x86_64): FLORAL_0.3.0.tgz |
Old sources: | FLORAL archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.