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CSeQTL: Cell Type-Specific Expression Quantitative Trail Loci Mapping

Perform bulk and cell type-specific expression quantitative trail loci mapping with our novel method (Little et al. (2023) <doi:10.1038/s41467-023-38795-w>).

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: Rcpp, smarter, ggplot2, multcomp, emdbook, MatrixEQTL, data.table, HelpersMG, R.utils, GenomicFeatures, methods
LinkingTo: Rcpp, RcppArmadillo
Suggests: rmarkdown, knitr
Published: 2025-03-06
DOI: 10.32614/CRAN.package.CSeQTL
Author: Paul Little [aut, cre]
Maintainer: Paul Little <pllittle321 at gmail.com>
License: GPL (≥ 3)
NeedsCompilation: yes
Citation: CSeQTL citation info
CRAN checks: CSeQTL results

Documentation:

Reference manual: CSeQTL.pdf
Vignettes: test (source, R code)

Downloads:

Package source: CSeQTL_1.0.0.tar.gz
Windows binaries: r-devel: CSeQTL_1.0.0.zip, r-release: CSeQTL_1.0.0.zip, r-oldrel: CSeQTL_1.0.0.zip
macOS binaries: r-devel (arm64): CSeQTL_1.0.0.tgz, r-release (arm64): CSeQTL_1.0.0.tgz, r-oldrel (arm64): CSeQTL_1.0.0.tgz, r-devel (x86_64): CSeQTL_1.0.0.tgz, r-release (x86_64): CSeQTL_1.0.0.tgz, r-oldrel (x86_64): CSeQTL_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=CSeQTL to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.