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morse: Modelling Reproduction and Survival Data in Ecotoxicology

Advanced methods for a valuable quantitative environmental risk assessment using Bayesian inference of survival and reproduction Data. Among others, it facilitates Bayesian inference of the general unified threshold model of survival (GUTS). See our companion paper Baudrot and Charles (2021) <doi:10.21105/joss.03200>, as well as complementary details in Baudrot et al. (2018) <doi:10.1021/acs.est.7b05464> and Delignette-Muller et al. (2017) <doi:10.1021/acs.est.6b05326>.

Version: 3.3.4
Depends: R (≥ 4.0.0)
Imports: coda, deSolve, dplyr, epitools, graphics, grDevices, ggplot2 (≥ 2.1.0), grid, gridExtra, magrittr, methods, reshape2, rjags (≥ 4.0), stats, tibble, tidyr, zoo
Suggests: knitr, rmarkdown, testthat
Published: 2024-09-18
DOI: 10.32614/CRAN.package.morse
Author: Virgile Baudrot [aut, cre], Sandrine Charles [aut], Marie Laure Delignette-Muller [aut], Wandrille Duchemin [ctb], Benoit Goussen [ctb], Nils Kehrein [ctb], Guillaume Kon-Kam-King [ctb], Christelle Lopes [ctb], Philippe Ruiz [ctb], Alexander Singer [ctb], Philippe Veber [aut]
Maintainer: Virgile Baudrot <virgile.baudrot at qonfluens.com>
BugReports: https://gitlab.in2p3.fr/mosaic-software/morse/-/issues
License: MIT + file LICENSE
URL: https://gitlab.in2p3.fr/mosaic-software/morse
NeedsCompilation: yes
SystemRequirements: JAGS (>= 4.0.0) (see https://mcmc-jags.sourceforge.io)
Materials: NEWS
CRAN checks: morse results

Documentation:

Reference manual: morse.pdf
Vignettes: How to generate a Minimal Working Example (source, R code)
Models in 'morse' package (source)
Tutorial (source, R code)

Downloads:

Package source: morse_3.3.4.tar.gz
Windows binaries: r-devel: morse_3.3.4.zip, r-release: morse_3.3.4.zip, r-oldrel: morse_3.3.4.zip
macOS binaries: r-release (arm64): morse_3.3.4.tgz, r-oldrel (arm64): morse_3.3.4.tgz, r-release (x86_64): morse_3.3.4.tgz, r-oldrel (x86_64): morse_3.3.4.tgz
Old sources: morse archive

Reverse dependencies:

Reverse suggests: odeGUTS

Linking:

Please use the canonical form https://CRAN.R-project.org/package=morse to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.