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Tools for 4D nucleome imaging. Quantitative analysis of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy. See Volker J. Schmid, Marion Cremer, Thomas Cremer (2017) <doi:10.1016/j.ymeth.2017.03.013>.
| Version: | 1.0.11 |
| Depends: | R (≥ 3.0.0), EBImage, bioimagetools (≥ 1.1.4) |
| Imports: | fields, parallel, stringr |
| Suggests: | knitr, rmarkdown, R.rsp |
| Published: | 2021-06-10 |
| DOI: | 10.32614/CRAN.package.nucim |
| Author: | Volker Schmid [aut, cre] |
| Maintainer: | Volker Schmid <volker.schmid at lmu.de> |
| BugReports: | https://github.com/bioimaginggroup/nucim/issues |
| License: | GPL-3 |
| URL: | https://bioimaginggroup.github.io/nucim/ |
| NeedsCompilation: | no |
| SystemRequirements: | tiff fftw libcurl openssl |
| Citation: | nucim citation info |
| Materials: | README NEWS |
| CRAN checks: | nucim results |
| Reference manual: | nucim.pdf |
| Vignettes: |
Chromatin compaction classification using DAPI intensity Workflow for nucleome analysis of many 3D SIM images Workflow for 3D SIM nucleome analysis |
| Package source: | nucim_1.0.11.tar.gz |
| Windows binaries: | r-devel: nucim_1.0.11.zip, r-release: nucim_1.0.11.zip, r-oldrel: nucim_1.0.11.zip |
| macOS binaries: | r-release (arm64): nucim_1.0.11.tgz, r-oldrel (arm64): nucim_1.0.11.tgz, r-release (x86_64): nucim_1.0.11.tgz, r-oldrel (x86_64): nucim_1.0.11.tgz |
| Old sources: | nucim archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.