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PEIMAN2: Post-Translational Modification Enrichment, Integration, and Matching Analysis

Functions and mined database from 'UniProt' focusing on post-translational modifications to do single enrichment analysis (SEA) and protein set enrichment analysis (PSEA). Payman Nickchi, Mehdi Mirzaie, Marc Baumann, Amir Ata Saei, Mohieddin Jafari (2022) <bioRxiv:10.1101/2022.11.09.515610>.

Version: 0.1.0
Depends: R (≥ 2.10), tidyverse
Imports: ggplot2, dplyr, glue, lifecycle, purrr, rlang, stringr, graphics, forcats, stats, magrittr
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2022-11-21
DOI: 10.32614/CRAN.package.PEIMAN2
Author: Mohieddin Jafari [aut], Payman Nickchi [aut, cre]
Maintainer: Payman Nickchi <pnickchi at sfu.ca>
License: GPL (≥ 3)
NeedsCompilation: no
Citation: PEIMAN2 citation info
Materials: README
CRAN checks: PEIMAN2 results

Documentation:

Reference manual: PEIMAN2.pdf
Vignettes: PEIMAN2-vignette

Downloads:

Package source: PEIMAN2_0.1.0.tar.gz
Windows binaries: r-devel: PEIMAN2_0.1.0.zip, r-release: PEIMAN2_0.1.0.zip, r-oldrel: PEIMAN2_0.1.0.zip
macOS binaries: r-release (arm64): PEIMAN2_0.1.0.tgz, r-oldrel (arm64): PEIMAN2_0.1.0.tgz, r-release (x86_64): PEIMAN2_0.1.0.tgz, r-oldrel (x86_64): PEIMAN2_0.1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PEIMAN2 to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.