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dendroNetwork: Create Networks of Dendrochronological Series using Pairwise Similarity

Creating dendrochronological networks based on the similarity between tree-ring series or chronologies. The package includes various functions to compare tree-ring curves building upon the 'dplR' package. The networks can be used to visualise and understand the relations between tree-ring curves. These networks are also very useful to estimate the provenance of wood as described in Visser (2021) <doi:10.5334/jcaa.79> or wood-use within a structure/context/site as described in Visser and Vorst (2022) <doi:10.1163/27723194-bja10014>.

Version: 0.5.4
Depends: R (≥ 4.1.0)
Imports: dplR (≥ 1.7.2), igraph, stringr, reshape2, RCy3, dplyr, RColorBrewer, tidyr, foreach, lifecycle, doParallel, stats, grDevices
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), DiagrammeR
Published: 2024-04-30
DOI: 10.32614/CRAN.package.dendroNetwork
Author: Ronald Visser ORCID iD [aut, cre], Angelino Salentino ORCID iD [ctb], Andy Bunn ORCID iD [ctb], Kaija Gahm [rev] (Kaija Gahm reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/627#issuecomment-1993235710), Zachary Gajewski [rev] (Zachary Gajewski reviewed the package for rOpenSci, see https://github.com/ropensci/software-review/issues/627#issuecomment-2037644081)
Maintainer: Ronald Visser <r.m.visser at saxion.nl>
BugReports: https://github.com/ropensci/dendroNetwork/issues
License: GPL (≥ 3)
URL: https://github.com/ropensci/dendroNetwork, https://ropensci.github.io/dendroNetwork/
NeedsCompilation: no
Citation: dendroNetwork citation info
Materials: README NEWS
CRAN checks: dendroNetwork results

Documentation:

Reference manual: dendroNetwork.pdf
Vignettes: cytoscape
dendroNetwork
dendrochronological_data
large_datasets_communities

Downloads:

Package source: dendroNetwork_0.5.4.tar.gz
Windows binaries: r-devel: dendroNetwork_0.5.4.zip, r-release: dendroNetwork_0.5.4.zip, r-oldrel: dendroNetwork_0.5.4.zip
macOS binaries: r-release (arm64): dendroNetwork_0.5.4.tgz, r-oldrel (arm64): dendroNetwork_0.5.4.tgz, r-release (x86_64): dendroNetwork_0.5.4.tgz, r-oldrel (x86_64): dendroNetwork_0.5.4.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.