dendroNetwork: Create Networks of Dendrochronological Series using Pairwise Similarity
Creating dendrochronological networks based on the similarity between tree-ring series or chronologies. The package includes various functions to compare tree-ring curves building upon the 'dplR' package. The networks can be used to visualise and understand the relations between tree-ring curves. These networks are also very useful to estimate the provenance of wood as described in Visser (2021) <doi:10.5334/jcaa.79> or wood-use within a structure/context/site as described in Visser and Vorst (2022) <doi:10.1163/27723194-bja10014>.
| Version: | 0.5.4 |
| Depends: | R (≥ 4.1.0) |
| Imports: | dplR (≥ 1.7.2), igraph, stringr, reshape2, RCy3, dplyr, RColorBrewer, tidyr, foreach, lifecycle, doParallel, stats, grDevices |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0), DiagrammeR |
| Published: | 2024-04-30 |
| Author: | Ronald Visser 
[aut, cre],
Angelino Salentino
[ctb],
Andy Bunn [ctb],
Kaija Gahm [rev] (Kaija Gahm reviewed the package for rOpenSci, see
https://github.com/ropensci/software-review/issues/627#issuecomment-1993235710),
Zachary Gajewski [rev] (Zachary Gajewski reviewed the package for
rOpenSci, see
https://github.com/ropensci/software-review/issues/627#issuecomment-2037644081) |
| Maintainer: | Ronald Visser <r.m.visser at saxion.nl> |
| BugReports: | https://github.com/ropensci/dendroNetwork/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/ropensci/dendroNetwork, https://ropensci.github.io/dendroNetwork/ |
| NeedsCompilation: | no |
| Citation: | dendroNetwork citation info |
| Materials: | README NEWS |
| CRAN checks: | dendroNetwork results |
Documentation:
| Reference manual: | dendroNetwork.pdf |
| Vignettes: |
cytoscape dendroNetwork dendrochronological_data large_datasets_communities |
Downloads:
| Package source: | dendroNetwork_0.5.4.tar.gz |
| Windows binaries: | r-devel: dendroNetwork_0.5.4.zip, r-release: not available, r-oldrel: dendroNetwork_0.5.4.zip |
| macOS binaries: | r-release (arm64): dendroNetwork_0.5.4.tgz, r-oldrel (arm64): dendroNetwork_0.5.4.tgz, r-release (x86_64): dendroNetwork_0.5.4.tgz, r-oldrel (x86_64): dendroNetwork_0.5.4.tgz |
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