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A collection of sampling formulas for the unified neutral model of biogeography and biodiversity. Alongside the sampling formulas, it includes methods to perform maximum likelihood optimization of the sampling formulas, methods to generate data given the neutral model, and methods to estimate the expected species abundance distribution. Sampling formulas included in the GUILDS package are the Etienne Sampling Formula (Etienne 2005), the guild sampling formula, where guilds are assumed to differ in dispersal ability (Janzen et al. 2015), and the guilds sampling formula conditioned on guild size (Janzen et al. 2015).
Version: | 1.4.6 |
Imports: | Rcpp (≥ 0.11.0), pracma, nloptr |
LinkingTo: | Rcpp |
Suggests: | testthat, knitr, rmarkdown |
Published: | 2023-08-21 |
DOI: | 10.32614/CRAN.package.GUILDS |
Author: | Thijs Janzen [aut, cre], Bart Haegeman [ctb], Franck Jabot [ctb], Jerome Chave [ctb] |
Maintainer: | Thijs Janzen <thijsjanzen at gmail.com> |
BugReports: | https://github.com/thijsjanzen/GUILDS/issues |
License: | GPL-2 |
URL: | https://github.com/thijsjanzen/GUILDS |
NeedsCompilation: | yes |
Materials: | README |
CRAN checks: | GUILDS results |
Reference manual: | GUILDS.pdf |
Vignettes: |
GUILDS Vignette |
Package source: | GUILDS_1.4.6.tar.gz |
Windows binaries: | r-devel: GUILDS_1.4.6.zip, r-release: GUILDS_1.4.6.zip, r-oldrel: GUILDS_1.4.6.zip |
macOS binaries: | r-release (arm64): GUILDS_1.4.6.tgz, r-oldrel (arm64): GUILDS_1.4.6.tgz, r-release (x86_64): GUILDS_1.4.6.tgz, r-oldrel (x86_64): GUILDS_1.4.6.tgz |
Old sources: | GUILDS archive |
Reverse imports: | sads |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.