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Facilitate the description, transformation, exploration, and reproducibility of metabarcoding analyses. 'MiscMetabar' is mainly built on top of the 'phyloseq', 'dada2' and 'targets' R packages. It helps to build reproducible and robust bioinformatics pipelines in R. 'MiscMetabar' makes ecological analysis of alpha and beta-diversity easier, more reproducible and more powerful by integrating a large number of tools. Important features are described in Taudière A. (2023) <doi:10.21105/joss.06038>.
Reference manual: | MiscMetabar.pdf |
Vignettes: |
Introduction (source, R code) |
Package source: | MiscMetabar_0.10.1.tar.gz |
Windows binaries: | r-devel: MiscMetabar_0.10.1.zip, r-release: MiscMetabar_0.10.1.zip, r-oldrel: MiscMetabar_0.10.1.zip |
macOS binaries: | r-release (arm64): MiscMetabar_0.10.1.tgz, r-oldrel (arm64): not available, r-release (x86_64): MiscMetabar_0.10.1.tgz, r-oldrel (x86_64): not available |
Old sources: | MiscMetabar archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.