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ace2fastq: ACE File to FASTQ Converter

The ACE file format is used in genomics to store contigs from sequencing machines. This tools converts it into FASTQ format. Both formats contain the sequence characters and their corresponding quality information. Unlike the FASTQ file, the ace file stores the quality values numerically. The conversion algorithm uses the standard Sanger formula. The package facilitates insertion into pipelines, and content inspection.

Version: 0.6.0
Imports: stringr
Suggests: testthat, knitr, rmarkdown, covr
Published: 2019-06-20
DOI: 10.32614/CRAN.package.ace2fastq
Author: Reinhard Simon ORCID iD [aut, cre]
Maintainer: Reinhard Simon <rsimon64 at gmail.com>
BugReports: https://github.com/c5sire/ace2fastq/issues
License: GPL-3
URL: https://github.com/c5sire/ace2fastq
NeedsCompilation: no
Materials: README NEWS
CRAN checks: ace2fastq results

Documentation:

Reference manual: ace2fastq.pdf
Vignettes: Tutorial

Downloads:

Package source: ace2fastq_0.6.0.tar.gz
Windows binaries: r-devel: ace2fastq_0.6.0.zip, r-release: ace2fastq_0.6.0.zip, r-oldrel: ace2fastq_0.6.0.zip
macOS binaries: r-release (arm64): ace2fastq_0.6.0.tgz, r-oldrel (arm64): ace2fastq_0.6.0.tgz, r-release (x86_64): ace2fastq_0.6.0.tgz, r-oldrel (x86_64): ace2fastq_0.6.0.tgz
Old sources: ace2fastq archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ace2fastq to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.