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milr: Multiple-Instance Logistic Regression with LASSO Penalty

The multiple instance data set consists of many independent subjects (called bags) and each subject is composed of several components (called instances). The outcomes of such data set are binary or categorical responses, and, we can only observe the subject-level outcomes. For example, in manufacturing processes, a subject is labeled as "defective" if at least one of its own components is defective, and otherwise, is labeled as "non-defective". The 'milr' package focuses on the predictive model for the multiple instance data set with binary outcomes and performs the maximum likelihood estimation with the Expectation-Maximization algorithm under the framework of logistic regression. Moreover, the LASSO penalty is attached to the likelihood function for simultaneous parameter estimation and variable selection.

Version: 0.3.1
Depends: R (≥ 3.2.3)
Imports: utils, pipeR (≥ 0.5), numDeriv, glmnet, Rcpp (≥ 0.12.0), RcppParallel
LinkingTo: Rcpp, RcppArmadillo, RcppParallel
Suggests: testthat, knitr, Hmisc, rmarkdown, data.table, ggplot2, plyr
Published: 2020-10-31
DOI: 10.32614/CRAN.package.milr
Author: Ping-Yang Chen [aut, cre], ChingChuan Chen [aut], Chun-Hao Yang [aut], Sheng-Mao Chang [aut]
Maintainer: Ping-Yang Chen <pychen.ping at gmail.com>
BugReports: https://github.com/PingYangChen/milr/issues
License: MIT + file LICENSE
URL: https://github.com/PingYangChen/milr
NeedsCompilation: yes
SystemRequirements: GNU make
CRAN checks: milr results

Documentation:

Reference manual: milr.pdf
Vignettes: milr\: Multiple-Instance Logistic Regression with Lasso Penalty

Downloads:

Package source: milr_0.3.1.tar.gz
Windows binaries: r-devel: milr_0.3.1.zip, r-release: milr_0.3.1.zip, r-oldrel: milr_0.3.1.zip
macOS binaries: r-release (arm64): milr_0.3.1.tgz, r-oldrel (arm64): milr_0.3.1.tgz, r-release (x86_64): milr_0.3.1.tgz, r-oldrel (x86_64): milr_0.3.1.tgz
Old sources: milr archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.