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Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.
| Version: | 3.0.0 |
| Depends: | R (≥ 3.2.0) |
| Imports: | foreach |
| Suggests: | devEMF, doParallel, grDevices |
| Published: | 2018-03-16 |
| DOI: | 10.32614/CRAN.package.fitPoly |
| Author: | Roeland E. Voorrips and Gerrit Gort |
| Maintainer: | Roeland E. Voorrips <roeland.voorrips at wur.nl> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | fitPoly results |
| Reference manual: | fitPoly.pdf |
| Package source: | fitPoly_3.0.0.tar.gz |
| Windows binaries: | r-devel: fitPoly_3.0.0.zip, r-release: fitPoly_3.0.0.zip, r-oldrel: fitPoly_3.0.0.zip |
| macOS binaries: | r-release (arm64): fitPoly_3.0.0.tgz, r-oldrel (arm64): fitPoly_3.0.0.tgz, r-release (x86_64): fitPoly_3.0.0.tgz, r-oldrel (x86_64): fitPoly_3.0.0.tgz |
| Reverse suggests: | mappoly |
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These binaries (installable software) and packages are in development.
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