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Automated method for doublet detection in flow or mass cytometry data, based on simulating doublets and finding events whose protein expression patterns are similar to the simulated doublets.
| Version: | 1.0.0 |
| Depends: | R (≥ 3.5) |
| Imports: | Rcpp, RcppHNSW, ggplot2, dplyr, tidyr, readr, reshape2, tibble, magrittr, methods |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | knitr, rmarkdown, vctrs |
| Published: | 2024-12-19 |
| DOI: | 10.32614/CRAN.package.Cleanet |
| Author: | Matei Ionita [aut, cre] |
| Maintainer: | Matei Ionita <matei.ionita at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| CRAN checks: | Cleanet results |
| Reference manual: | Cleanet.pdf |
| Vignettes: |
Cleanet for Mass Cytometry (source, R code) |
| Package source: | Cleanet_1.0.0.tar.gz |
| Windows binaries: | r-devel: Cleanet_1.0.0.zip, r-release: Cleanet_1.0.0.zip, r-oldrel: Cleanet_1.0.0.zip |
| macOS binaries: | r-release (arm64): Cleanet_1.0.0.tgz, r-oldrel (arm64): Cleanet_1.0.0.tgz, r-release (x86_64): Cleanet_1.0.0.tgz, r-oldrel (x86_64): Cleanet_1.0.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.