conStruct: Models Spatially Continuous and Discrete Population Genetic Structure

A method for modeling genetic data as a combination of discrete layers, within each of which relatedness may decay continuously with geographic distance. This package contains code for running analyses (which are implemented in the modeling language 'rstan') and visualizing and interpreting output. See the paper for more details on the model and its utility.

Version:	1.0.6
Depends:	R (≥ 3.4.0), Rcpp (≥ 0.12.0), methods
Imports:	rstan (≥ 2.26.0), rstantools (≥ 1.5.0), caroline, gtools, foreach, parallel, doParallel
LinkingTo:	StanHeaders (≥ 2.26.0), rstan (≥ 2.26.0), BH (≥ 1.66.0), Rcpp (≥ 0.12.0), RcppEigen (≥ 0.3.3.3.0), RcppParallel (≥ 5.0.1)
Suggests:	knitr, rmarkdown, maps
Published:	2024-01-08
DOI:	10.32614/CRAN.package.conStruct
Author:	Gideon Bradburd [aut, cre]
Maintainer:	Gideon Bradburd <bradburd at umich.edu>
License:	GPL-3
NeedsCompilation:	yes
SystemRequirements:	GNU make
Materials:	NEWS ChangeLog
CRAN checks:	conStruct results

Documentation:

Reference manual:	conStruct.pdf
Vignettes:	format-data model-comparison run-conStruct visualize-results

Downloads:

Package source:	conStruct_1.0.6.tar.gz
Windows binaries:	r-devel: conStruct_1.0.6.zip, r-release: conStruct_1.0.6.zip, r-oldrel: conStruct_1.0.6.zip
macOS binaries:	r-release (arm64): conStruct_1.0.6.tgz, r-oldrel (arm64): conStruct_1.0.6.tgz, r-release (x86_64): conStruct_1.0.6.tgz, r-oldrel (x86_64): conStruct_1.0.6.tgz
Old sources:	conStruct archive

Linking:

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