autothresholdr: An R Port of the 'ImageJ' Plugin 'Auto Threshold'
Algorithms for automatically finding appropriate thresholds for numerical data, with special functions for thresholding images. Provides the 'ImageJ' 'Auto Threshold' plugin functionality to R users. See <https://imagej.net/plugins/auto-threshold> and Landini et al. (2017) <doi:10.1111/jmi.12474>.
| Version: | 1.4.2 |
| Depends: | R (≥ 3.5) |
| Imports: | checkmate (≥ 1.9.3), ijtiff (≥ 2.2), magrittr (≥ 1.5), purrr, Rcpp (≥ 1.0.11), rlang (≥ 0.3.3), stats, strex (≥ 1.4.1), stringr (≥ 1.4) |
| LinkingTo: | Rcpp (≥ 1.0.11) |
| Suggests: | covr, dplyr, ggplot2, knitr, rmarkdown, spelling, styler (≥ 1.3.2), testthat (≥ 3.0), utils |
| Published: | 2023-12-13 |
| DOI: | 10.32614/CRAN.package.autothresholdr |
| Author: | Rory Nolan  [aut,
cre, trl],
Luis Alvarez
[ctb],
Sergi Padilla-Parra
[ctb, ths],
Gabriel Landini
[ctb, cph] |
| Maintainer: | Rory Nolan <rorynoolan at gmail.com> |
| BugReports: | https://github.com/rorynolan/autothresholdr/issues |
| License: | GPL-3 |
| URL: | https://rorynolan.github.io/autothresholdr/, https://github.com/rorynolan/autothresholdr#readme |
| NeedsCompilation: | yes |
| Language: | en-US |
| Citation: | autothresholdr citation info |
| Materials: | NEWS |
| CRAN checks: | autothresholdr results |
Documentation:
| Reference manual: | autothresholdr.pdf |
| Vignettes: |
Finding Thresholds Thresholding Image Stacks Thresholding Images |
Downloads:
| Package source: | autothresholdr_1.4.2.tar.gz |
| Windows binaries: | r-devel: autothresholdr_1.4.2.zip, r-release: autothresholdr_1.4.2.zip, r-oldrel: autothresholdr_1.4.2.zip |
| macOS binaries: | r-release (arm64): autothresholdr_1.4.2.tgz, r-oldrel (arm64): autothresholdr_1.4.2.tgz, r-release (x86_64): autothresholdr_1.4.2.tgz, r-oldrel (x86_64): autothresholdr_1.4.2.tgz |
| Old sources: | autothresholdr archive |
Reverse dependencies:
| Reverse imports: | coveR2, detrendr, hemispheR, nandb |
| Reverse suggests: | rcaiman |
Linking:
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