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ggmuller: Create Muller Plots of Evolutionary Dynamics

Create plots that combine a phylogeny and frequency dynamics. Phylogenetic input can be a generic adjacency matrix or a tree of class "phylo". Inspired by similar plots in publications of the labs of RE Lenski and JE Barrick. Named for HJ Muller (who popularised such plots) and H Wickham (whose code this package exploits).

Version: 0.5.6
Depends: R (≥ 3.2.0)
Imports: dplyr (≥ 0.7.0), ggplot2, ape
Suggests: RColorBrewer, knitr, rmarkdown
Published: 2023-02-12
DOI: 10.32614/CRAN.package.ggmuller
Author: Robert Noble ORCID iD [aut, cre]
Maintainer: Robert Noble <robjohnnoble at gmail.com>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README
In views: Phylogenetics
CRAN checks: ggmuller results

Documentation:

Reference manual: ggmuller.pdf
Vignettes: Introduction to ggmuller

Downloads:

Package source: ggmuller_0.5.6.tar.gz
Windows binaries: r-devel: ggmuller_0.5.6.zip, r-release: ggmuller_0.5.6.zip, r-oldrel: ggmuller_0.5.6.zip
macOS binaries: r-release (arm64): ggmuller_0.5.6.tgz, r-oldrel (arm64): ggmuller_0.5.6.tgz, r-release (x86_64): ggmuller_0.5.6.tgz, r-oldrel (x86_64): ggmuller_0.5.6.tgz
Old sources: ggmuller archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.