JBrowseR: An R Interface to the JBrowse 2 Genome Browser

Provides an R interface to the JBrowse 2 genome browser. Enables embedding a JB2 genome browser in a Shiny app or R Markdown document. The browser can also be launched from an interactive R console. The browser can be loaded with a variety of common genomics data types, and can be used with a custom theme.

Version:	0.10.2
Imports:	htmltools, htmlwidgets, reactR, stringr, magrittr, readr, jsonlite, httpuv, mime, cli, ids, dplyr
Suggests:	testthat (≥ 3.0.0), knitr, rmarkdown
Published:	2023-12-20
DOI:	10.32614/CRAN.package.JBrowseR
Author:	Elliot Hershberg [aut], Colin Diesh [aut, cre], the JBrowse 2 Team [aut]
Maintainer:	Colin Diesh <colin.diesh at gmail.com>
License:	Apache License (≥ 2)
URL:	https://gmod.github.io/JBrowseR/ https://github.com/GMOD/JBrowseR
NeedsCompilation:	no
Materials:	README NEWS
In views:	Omics
CRAN checks:	JBrowseR results

Documentation:

Reference manual:	JBrowseR.pdf
Vignettes:	Introduction to JBrowseR Creating URLs Custom browser tutorial Advanced JSON tutorial

Downloads:

Package source:	JBrowseR_0.10.2.tar.gz
Windows binaries:	r-devel: JBrowseR_0.10.2.zip, r-release: JBrowseR_0.10.2.zip, r-oldrel: JBrowseR_0.10.2.zip
macOS binaries:	r-release (arm64): JBrowseR_0.10.2.tgz, r-oldrel (arm64): JBrowseR_0.10.2.tgz, r-release (x86_64): JBrowseR_0.10.2.tgz, r-oldrel (x86_64): JBrowseR_0.10.2.tgz
Old sources:	JBrowseR archive

Reverse dependencies:

Reverse imports:

viewpoly

Linking:

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