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microhaplot: Microhaplotype Constructor and Visualizer

A downstream bioinformatics tool to construct and assist curation of microhaplotypes from short read sequences.

Version: 1.0.1
Depends: R (≥ 3.1.2)
Imports: DT (≥ 0.1), dplyr (≥ 0.4.3), ggplot2 (≥ 2.1.0), grid (≥ 3.1.2), gtools (≥ 3.5.0), magrittr (≥ 1.5), scales (≥ 0.4.0), shiny (≥ 0.13.2), shinyBS (≥ 0.61), tidyr (≥ 0.4.1), shinyWidgets (≥ 0.4.3), ggiraph (≥ 0.6.0)
Suggests: knitr, rmarkdown
Published: 2019-10-03
DOI: 10.32614/CRAN.package.microhaplot
Author: Thomas Ng [aut, cre]
Maintainer: Thomas Ng <tngthomasng at gmail.com>
BugReports: https://github.com/ngthomas/microhaplot/issues
License: GPL-3
URL: https://github.com/ngthomas/microhaplot
NeedsCompilation: no
Materials: README NEWS
CRAN checks: microhaplot results

Documentation:

Reference manual: microhaplot.pdf
Vignettes: microhaplot data prep
microhaplot walkthrough
Package Troubleshoot

Downloads:

Package source: microhaplot_1.0.1.tar.gz
Windows binaries: r-devel: microhaplot_1.0.1.zip, r-release: microhaplot_1.0.1.zip, r-oldrel: microhaplot_1.0.1.zip
macOS binaries: r-release (arm64): microhaplot_1.0.1.tgz, r-oldrel (arm64): microhaplot_1.0.1.tgz, r-release (x86_64): microhaplot_1.0.1.tgz, r-oldrel (x86_64): microhaplot_1.0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=microhaplot to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.