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A set of tools to reconstruct ordered ontogenic trajectories from single cell RNAseq data.
| Version: | 1.0 |
| Depends: | R (≥ 3.0) |
| Imports: | animation (≥ 2.4), rARPACK (≥ 0.11-0), igraph (≥ 1.0.0) |
| Suggests: | knitr, rmarkdown |
| Published: | 2017-07-11 |
| DOI: | 10.32614/CRAN.package.roots |
| Author: | Wajid Jawaid [aut, cre] |
| Maintainer: | Wajid Jawaid <wj241 at cam.ac.uk> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | roots results |
| Reference manual: | roots.pdf |
| Vignettes: |
Infer biologically plausible journeys through single cell data |
| Package source: | roots_1.0.tar.gz |
| Windows binaries: | r-devel: roots_1.0.zip, r-release: roots_1.0.zip, r-oldrel: roots_1.0.zip |
| macOS binaries: | r-release (arm64): roots_1.0.tgz, r-oldrel (arm64): roots_1.0.tgz, r-release (x86_64): roots_1.0.tgz, r-oldrel (x86_64): roots_1.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.