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ggpmisc: Miscellaneous Extensions to 'ggplot2'

Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Statistics: locate and tag peaks and valleys; label plot with the equation of a fitted polynomial or other types of models; labels with P-value, R^2 or adjusted R^2 or information criteria for fitted models; label with ANOVA table for fitted models; label with summary for fitted models. Model fit classes for which suitable methods are provided by package 'broom' and 'broom.mixed' are supported. Scales and stats to build volcano and quadrant plots based on outcomes, fold changes, p-values and false discovery rates.

Version: 0.6.1
Depends: R (≥ 4.0.0), ggpp (≥ 0.5.8)
Imports: grid, stats, ggplot2 (≥ 3.5.0), scales (≥ 1.3.0), rlang (≥ 1.1.3), generics (≥ 0.1.3), MASS (≥ 7.3-60.0.1), confintr (≥ 1.0.2), polynom (≥ 1.4-1), quantreg (≥ 5.97), lmodel2 (≥ 1.7-3), splus2R (≥ 1.3-5), multcomp (≥ 1.4-25), multcompView (≥ 0.1-10), tibble (≥ 3.2.1), plyr (≥ 1.8.9), dplyr (≥ 1.1.4), lubridate (≥ 1.9.3)
Suggests: knitr (≥ 1.45), rmarkdown (≥ 2.25), ggrepel (≥ 0.9.5), broom (≥ 1.0.3), broom.mixed (≥ 0.2.9.5), nlme (≥ 3.1-160), gginnards (≥ 0.1.0-1), ggtext (≥ 0.1.2), testthat, vdiffr
Published: 2024-11-14
DOI: 10.32614/CRAN.package.ggpmisc
Author: Pedro J. Aphalo ORCID iD [aut, cre], Kamil Slowikowski ORCID iD [ctb], Samer Mouksassi ORCID iD [ctb]
Maintainer: Pedro J. Aphalo <pedro.aphalo at helsinki.fi>
BugReports: https://github.com/aphalo/ggpmisc/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://docs.r4photobiology.info/ggpmisc/, https://github.com/aphalo/ggpmisc
NeedsCompilation: no
Materials: README NEWS
CRAN checks: ggpmisc results

Documentation:

Reference manual: ggpmisc.pdf
Vignettes: Fitted-Model-Based Annotations (source, R code)

Downloads:

Package source: ggpmisc_0.6.1.tar.gz
Windows binaries: r-devel: ggpmisc_0.6.1.zip, r-release: ggpmisc_0.6.1.zip, r-oldrel: ggpmisc_0.6.1.zip
macOS binaries: r-release (arm64): ggpmisc_0.6.1.tgz, r-oldrel (arm64): ggpmisc_0.6.1.tgz, r-release (x86_64): ggpmisc_0.6.1.tgz, r-oldrel (x86_64): ggpmisc_0.6.1.tgz
Old sources: ggpmisc archive

Reverse dependencies:

Reverse imports: CEMiTool, CRMetrics, explainer, forestmangr, ggquickeda, hydroroute, methylclock, neutralitytestr, qPCRtools, RQdeltaCT, shinyTempSignal, simET, visa
Reverse suggests: chem16S, coveffectsplot, MetaNet, pctax, pcutils, rTwig, teal.modules.general

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ggpmisc to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.