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GeometricMorphometricsMix: Heterogeneous Methods for Shape and Other Multidimensional Data

Tools for geometric morphometric analyses and multidimensional data. Implements methods for morphological disparity analysis using bootstrap and rarefaction, as reviewed in Foote (1997) <doi:10.1146/annurev.ecolsys.28.1.129>. Includes integration and modularity testing, following Fruciano et al. (2013) <doi:10.1371/journal.pone.0069376>, using Escoufier's RV coefficient as test statistic as well as two-block partial least squares - PLS, Rohlf and Corti (2000) <doi:10.1080/106351500750049806>. Also includes vector angle comparisons, orthogonal projection for data correction (Burnaby (1966) <doi:10.2307/2528217>; Fruciano (2016) <doi:10.1007/s00427-016-0537-4>), and parallel analysis for dimensionality reduction (Buja and Eyuboglu (1992) <doi:10.1207/s15327906mbr2704_2>).

Version: 0.6.0.1
Depends: R (≥ 3.5.0), ape, stats, corpcor
Imports: methods, mclust
Suggests: Morpho, utils, geometry, nlshrink, lmf, MASS, clusterGeneration, ggplot2, Rmpfr, knitr, rmarkdown, phytools, mvMORPH, testthat (≥ 3.0.0), future, future.apply
Published: 2026-01-27
DOI: 10.32614/CRAN.package.GeometricMorphometricsMix (may not be active yet)
Author: Carmelo Fruciano [aut, cre]
Maintainer: Carmelo Fruciano <carmelo.fruciano at unict.it>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: GeometricMorphometricsMix results

Documentation:

Reference manual: GeometricMorphometricsMix.html , GeometricMorphometricsMix.pdf
Vignettes: Analysis of Disparity: Estimating and Comparing How Variable Phenotype Is (source, R code)
Partial Least Squares (PLS) Analysis (source, R code)

Downloads:

Package source: GeometricMorphometricsMix_0.6.0.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): GeometricMorphometricsMix_0.6.0.1.tgz, r-oldrel (arm64): GeometricMorphometricsMix_0.6.0.1.tgz, r-release (x86_64): GeometricMorphometricsMix_0.6.0.1.tgz, r-oldrel (x86_64): GeometricMorphometricsMix_0.6.0.1.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.