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A collection of small functions useful for epidemics analysis and infectious disease modelling. This includes computation of basic reproduction numbers from growth rates, generation of hashed labels to anonymize data, and fitting discretized Gamma distributions.
| Version: | 0.4.0 |
| Depends: | R (≥ 3.3.0) |
| Imports: | sodium, distcrete, stringi, dplyr, purrr, rlang, tidyr |
| Suggests: | testthat, roxygen2, outbreaks, incidence (≥ 1.4.1), knitr, rmarkdown, magrittr, ggplot2, tibble, covr |
| Published: | 2023-01-13 |
| DOI: | 10.32614/CRAN.package.epitrix |
| Author: | Thibaut Jombart [aut, cre], Anne Cori [aut], Zhian N. Kamvar [ctb], Dirk Schumacher [ctb], Flavio Finger [aut], Charlie Whittaker [ctb] |
| Maintainer: | Thibaut Jombart <thibautjombart at gmail.com> |
| BugReports: | https://github.com/reconhub/epitrix/issues |
| License: | MIT + file LICENSE |
| URL: | http://www.repidemicsconsortium.org/epitrix/ |
| NeedsCompilation: | no |
| Materials: | NEWS |
| In views: | Epidemiology |
| CRAN checks: | epitrix results |
| Reference manual: | epitrix.pdf |
| Vignettes: |
Overview Estimating Incubation Period |
| Package source: | epitrix_0.4.0.tar.gz |
| Windows binaries: | r-devel: epitrix_0.4.0.zip, r-release: epitrix_0.4.0.zip, r-oldrel: epitrix_0.4.0.zip |
| macOS binaries: | r-release (arm64): epitrix_0.4.0.tgz, r-oldrel (arm64): epitrix_0.4.0.tgz, r-release (x86_64): epitrix_0.4.0.tgz, r-oldrel (x86_64): epitrix_0.4.0.tgz |
| Old sources: | epitrix archive |
| Reverse imports: | earlyR, sivirep |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.