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rmzqc: Creation, Reading and Validation of 'mzqc' Files

Reads, writes and validates 'mzQC' files. The 'mzQC' format is a standardized file format for the exchange, transmission, and archiving of quality metrics derived from biological mass spectrometry data, as defined by the HUPO-PSI (Human Proteome Organisation - Proteomics Standards Initiative) Quality Control working group. See <https://hupo-psi.github.io/mzQC/> for details.

Version: 0.5.4
Imports: jsonlite, jsonvalidate, knitr, methods, ontologyIndex, rmarkdown, R6, R6P, testthat, tools
Published: 2024-04-16
DOI: 10.32614/CRAN.package.rmzqc
Author: Chris Bielow ORCID iD [aut, cre], David Jimenez-Morales ORCID iD [rev, ctb]
Maintainer: Chris Bielow <chris.bielow at bsc.fu-berlin.de>
BugReports: https://github.com/MS-Quality-hub/rmzqc/issues
License: MIT + file LICENSE
URL: https://github.com/MS-Quality-hub/rmzqc
NeedsCompilation: no
Materials: README NEWS
CRAN checks: rmzqc results

Documentation:

Reference manual: rmzqc.pdf
Vignettes: Basic R-Usage Guide for rMZQC
Using a custom controlled vocabulary for rMZQC
Validation of mzQC documents

Downloads:

Package source: rmzqc_0.5.4.tar.gz
Windows binaries: r-devel: rmzqc_0.5.4.zip, r-release: rmzqc_0.5.4.zip, r-oldrel: rmzqc_0.5.4.zip
macOS binaries: r-release (arm64): rmzqc_0.5.4.tgz, r-oldrel (arm64): rmzqc_0.5.4.tgz, r-release (x86_64): rmzqc_0.5.4.tgz, r-oldrel (x86_64): rmzqc_0.5.4.tgz
Old sources: rmzqc archive

Reverse dependencies:

Reverse imports: MsQuality, PTXQC

Linking:

Please use the canonical form https://CRAN.R-project.org/package=rmzqc to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.