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General-purpose MCMC and SMC samplers, as well as plot and diagnostic functions for Bayesian statistics, with a particular focus on calibrating complex system models. Implemented samplers include various Metropolis MCMC variants (including adaptive and/or delayed rejection MH), the T-walk, two differential evolution MCMCs, two DREAM MCMCs, and a sequential Monte Carlo (SMC) particle filter.
Version: | 0.1.8 |
Depends: | R (≥ 3.1.2) |
Imports: | coda, emulator, mvtnorm, tmvtnorm, IDPmisc, Rcpp (≥ 0.12.12), ellipse, numDeriv, msm, MASS, Matrix, stats, utils, graphics, DHARMa, gap, bridgesampling |
LinkingTo: | Rcpp |
Suggests: | DEoptim, lhs, sensitivity, knitr, rmarkdown, roxygen2, testthat |
Published: | 2023-01-30 |
DOI: | 10.32614/CRAN.package.BayesianTools |
Author: | Florian Hartig |
Maintainer: | Florian Hartig <florian.hartig at biologie.uni-regensburg.de> |
BugReports: | https://github.com/florianhartig/BayesianTools/issues |
License: | GPL-3 |
URL: | https://github.com/florianhartig/BayesianTools |
NeedsCompilation: | yes |
Materials: | NEWS |
In views: | Bayesian |
CRAN checks: | BayesianTools results |
Reference manual: | BayesianTools.pdf |
Vignettes: |
Manual for the BayesianTools R package Interfacing your model with R |
Package source: | BayesianTools_0.1.8.tar.gz |
Windows binaries: | r-devel: BayesianTools_0.1.8.zip, r-release: BayesianTools_0.1.8.zip, r-oldrel: BayesianTools_0.1.8.zip |
macOS binaries: | r-release (arm64): BayesianTools_0.1.8.tgz, r-oldrel (arm64): BayesianTools_0.1.8.tgz, r-release (x86_64): BayesianTools_0.1.8.tgz, r-oldrel (x86_64): BayesianTools_0.1.8.tgz |
Old sources: | BayesianTools archive |
Reverse imports: | DPTM, eDITH |
Reverse suggests: | apsimx, ProfoundData, pttstability, r3PG |
Reverse enhances: | DHARMa |
Please use the canonical form https://CRAN.R-project.org/package=BayesianTools to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.