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RScelestial: Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference

Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.

Version: 1.0.4
Imports: Rcpp (≥ 1.0.1)
LinkingTo: Rcpp
Suggests: igraph, knitr, rmarkdown, stringr, seqinr, spelling
Published: 2023-11-30
DOI: 10.32614/CRAN.package.RScelestial
Author: Mohammad Hadi Foroughmand Araabi [aut, cre], Sama Goliaei [aut, ctb], Alice McHardy [ctb]
Maintainer: Mohammad Hadi Foroughmand Araabi <foroughmand at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Language: en-US
Materials: NEWS
CRAN checks: RScelestial results

Documentation:

Reference manual: RScelestial.pdf
Vignettes: RScelestial Vignette

Downloads:

Package source: RScelestial_1.0.4.tar.gz
Windows binaries: r-devel: RScelestial_1.0.4.zip, r-release: RScelestial_1.0.4.zip, r-oldrel: RScelestial_1.0.4.zip
macOS binaries: r-release (arm64): RScelestial_1.0.4.tgz, r-oldrel (arm64): RScelestial_1.0.4.tgz, r-release (x86_64): RScelestial_1.0.4.tgz, r-oldrel (x86_64): RScelestial_1.0.4.tgz
Old sources: RScelestial archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=RScelestial to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.