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Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.
Version: | 1.0.4 |
Imports: | Rcpp (≥ 1.0.1) |
LinkingTo: | Rcpp |
Suggests: | igraph, knitr, rmarkdown, stringr, seqinr, spelling |
Published: | 2023-11-30 |
DOI: | 10.32614/CRAN.package.RScelestial |
Author: | Mohammad Hadi Foroughmand Araabi [aut, cre], Sama Goliaei [aut, ctb], Alice McHardy [ctb] |
Maintainer: | Mohammad Hadi Foroughmand Araabi <foroughmand at gmail.com> |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
NeedsCompilation: | yes |
Language: | en-US |
Materials: | NEWS |
CRAN checks: | RScelestial results |
Reference manual: | RScelestial.pdf |
Vignettes: |
RScelestial Vignette |
Package source: | RScelestial_1.0.4.tar.gz |
Windows binaries: | r-devel: RScelestial_1.0.4.zip, r-release: RScelestial_1.0.4.zip, r-oldrel: RScelestial_1.0.4.zip |
macOS binaries: | r-release (arm64): RScelestial_1.0.4.tgz, r-oldrel (arm64): RScelestial_1.0.4.tgz, r-release (x86_64): RScelestial_1.0.4.tgz, r-oldrel (x86_64): RScelestial_1.0.4.tgz |
Old sources: | RScelestial archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.