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poolHelper: Simulates Pooled Sequencing Genetic Data

Simulates pooled sequencing data under a variety of conditions. Also allows for the evaluation of the average absolute difference between allele frequencies computed from genotypes and those computed from pooled data. Carvalho et al., (2022) <doi:10.1101/2023.01.20.524733>.

Version: 1.1.0
Imports: MCMCpack, Metrics, scrm, stats
Suggests: knitr, rmarkdown, ggplot2, testthat (≥ 3.0.0)
Published: 2023-06-29
DOI: 10.32614/CRAN.package.poolHelper
Author: João Carvalho ORCID iD [aut, cre], Vítor Sousa [aut]
Maintainer: João Carvalho <jgcarvalho at fc.ul.pt>
BugReports: https://github.com/joao-mcarvalho/poolHelper/issues
License: GPL (≥ 3)
URL: https://github.com/joao-mcarvalho/poolHelper
NeedsCompilation: no
Materials: README NEWS
CRAN checks: poolHelper results

Documentation:

Reference manual: poolHelper.pdf
Vignettes: poolvignette

Downloads:

Package source: poolHelper_1.1.0.tar.gz
Windows binaries: r-devel: poolHelper_1.1.0.zip, r-release: poolHelper_1.1.0.zip, r-oldrel: poolHelper_1.1.0.zip
macOS binaries: r-release (arm64): poolHelper_1.1.0.tgz, r-oldrel (arm64): poolHelper_1.1.0.tgz, r-release (x86_64): poolHelper_1.1.0.tgz, r-oldrel (x86_64): poolHelper_1.1.0.tgz
Old sources: poolHelper archive

Reverse dependencies:

Reverse imports: poolABC

Linking:

Please use the canonical form https://CRAN.R-project.org/package=poolHelper to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.