The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

mbmixture: Microbiome Mixture Analysis

Evaluate whether a microbiome sample is a mixture of two samples, by fitting a model for the number of read counts as a function of single nucleotide polymorphism (SNP) allele and the genotypes of two potential source samples. Lobo et al. (2021) <doi:10.1093/g3journal/jkab308>.

Version:	0.6
Depends:	R (≥ 3.1.0)
Imports:	stats, parallel, numDeriv
Suggests:	knitr, rmarkdown, testthat, devtools, roxygen2
Published:	2024-11-27
DOI:	10.32614/CRAN.package.mbmixture
Author:	Karl W Broman [aut, cre]
Maintainer:	Karl W Broman <broman at wisc.edu>
BugReports:	https://github.com/kbroman/mbmixture/issues
License:	MIT + file LICENSE
URL:	https://github.com/kbroman/mbmixture
NeedsCompilation:	no
Citation:	mbmixture citation info
Materials:	README NEWS
CRAN checks:	mbmixture results

Documentation:

Reference manual:	mbmixture.pdf
Vignettes:	R/mbmixture User Guide (source, R code)

Downloads:

Package source:	mbmixture_0.6.tar.gz
Windows binaries:	r-devel: mbmixture_0.6.zip, r-release: mbmixture_0.6.zip, r-oldrel: mbmixture_0.6.zip
macOS binaries:	r-release (arm64): mbmixture_0.6.tgz, r-oldrel (arm64): mbmixture_0.6.tgz, r-release (x86_64): mbmixture_0.6.tgz, r-oldrel (x86_64): mbmixture_0.6.tgz
Old sources:	mbmixture archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=mbmixture to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.