The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
User-friendly framework that enables the training and the evaluation of species distribution models (SDMs). The package implements functions for data driven variable selection and model tuning and includes numerous utilities to display the results. All the functions used to select variables or to tune model hyperparameters have an interactive real-time chart displayed in the 'RStudio' viewer pane during their execution.
Version: | 1.3.1 |
Depends: | R (≥ 4.1.0) |
Imports: | cli (≥ 3.4.1), dismo (≥ 1.3-9), gbm (≥ 2.1.5), ggplot2 (≥ 3.4.0), jsonlite (≥ 1.6), maxnet (≥ 0.1.4), methods, nnet (≥ 7.3-12), randomForest (≥ 4.6-14), Rcpp (≥ 1.0.1), rlang (≥ 0.4.5), rstudioapi (≥ 0.10), stringr (≥ 1.4.0), terra (≥ 1.6-47), whisker (≥ 0.3-2) |
LinkingTo: | Rcpp |
Suggests: | covr, htmltools (≥ 0.3.6), kableExtra (≥ 1.1.0), knitr (≥ 1.23), maps (≥ 3.3.0), pkgdown (≥ 2.0.7), plotROC (≥ 2.2.1), rasterVis (≥ 0.50), reshape2 (≥ 1.4.3), rJava (≥ 0.9-11), rmarkdown (≥ 2.16), scales (≥ 1.0.0), testthat (≥ 3.1.7), withr (≥ 2.5.0), zeallot (≥ 0.1.0) |
Published: | 2023-07-03 |
DOI: | 10.32614/CRAN.package.SDMtune |
Author: | Sergio Vignali [aut, cre], Arnaud Barras [aut], Veronika Braunisch [aut], Conservation Biology - University of Bern [fnd] |
Maintainer: | Sergio Vignali <sergio.vignali at unibe.ch> |
BugReports: | https://github.com/ConsBiol-unibern/SDMtune/issues |
License: | GPL-3 |
URL: | https://consbiol-unibern.github.io/SDMtune/ |
NeedsCompilation: | yes |
SystemRequirements: | Java (>= 8) |
Language: | en-US |
Citation: | SDMtune citation info |
Materials: | README NEWS |
CRAN checks: | SDMtune results |
Reference manual: | SDMtune.pdf |
Vignettes: |
SDMtune - basic use SDMtune - hyperparameter tuning SDMtune - presence absence models SDMtune - variable selection |
Package source: | SDMtune_1.3.1.tar.gz |
Windows binaries: | r-devel: SDMtune_1.3.1.zip, r-release: SDMtune_1.3.1.zip, r-oldrel: SDMtune_1.3.1.zip |
macOS binaries: | r-release (arm64): SDMtune_1.3.1.tgz, r-oldrel (arm64): SDMtune_1.3.1.tgz, r-release (x86_64): SDMtune_1.3.1.tgz, r-oldrel (x86_64): SDMtune_1.3.1.tgz |
Old sources: | SDMtune archive |
Please use the canonical form https://CRAN.R-project.org/package=SDMtune to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.