ATQ: Alert Time Quality - Evaluating Timely Epidemic Metrics

Provides tools for evaluating timely epidemic detection models within school absenteeism-based surveillance systems. Introduces the concept of alert time quality as an evaluation metric. Includes functions to simulate populations, epidemics, and alert metrics associated with epidemic spread using population census data. The methods are based on research published in Vanderkruk et al. (2023) <doi:10.1186/s12889-023-15747-z> and Ward et al. (2019) <doi:10.1186/s12889-019-7521-7>.

Version:	0.2.3
Depends:	R (≥ 2.10)
Imports:	dplyr, purrr, zoo, ggplot2, gridExtra, rlang, scales
Suggests:	knitr, rmarkdown, cli, fansi, farver, utf8, devtools, testthat (≥ 3.0.0)
Published:	2024-08-18
DOI:	10.32614/CRAN.package.ATQ
Author:	Vinay Joshy [aut, cre, cph], Zeny Feng [aut, cph, ths], Lorna Deeth [aut, cph, ths], Justin Slater [aut, cph, ths], Kayla Vanderkruk [aut, com, ctb]
Maintainer:	Vinay Joshy <joshy at uoguelph.ca>
BugReports:	https://github.com/vjoshy/ATQ_Surveillance_Package/issues
License:	GPL (≥ 3)
URL:	https://github.com/vjoshy/ATQ_Surveillance_Package
NeedsCompilation:	no
Materials:	README NEWS
CRAN checks:	ATQ results

Documentation:

Reference manual:	ATQ.pdf
Vignettes:	ATQ_Guide (source, R code)

Downloads:

Package source:	ATQ_0.2.3.tar.gz
Windows binaries:	r-devel: ATQ_0.2.3.zip, r-release: ATQ_0.2.3.zip, r-oldrel: ATQ_0.2.3.zip
macOS binaries:	r-release (arm64): ATQ_0.2.3.tgz, r-oldrel (arm64): ATQ_0.2.3.tgz, r-release (x86_64): ATQ_0.2.3.tgz, r-oldrel (x86_64): ATQ_0.2.3.tgz
Old sources:	ATQ archive

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