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ATQ: Alert Time Quality - Evaluating Timely Epidemic Metrics

Provides tools for evaluating timely epidemic detection models within school absenteeism-based surveillance systems. Introduces the concept of alert time quality as an evaluation metric. Includes functions to simulate populations, epidemics, and alert metrics associated with epidemic spread using population census data. The methods are based on research published in Vanderkruk et al. (2023) <doi:10.1186/s12889-023-15747-z> and Jarvis et al. (2019) <doi:10.1186/s12889-019-7521-7>.

Version: 0.2.0
Depends: R (≥ 2.10)
Imports: dplyr, purrr, zoo, ggplot2, gridExtra, rlang, scales
Suggests: knitr, rmarkdown, cli, fansi, farver, utf8, devtools, testthat (≥ 3.0.0)
Published: 2024-07-27
Author: Vinay Joshy [aut, cre, cph], Zeny Feng [aut, cph, ths], Lorna Deeth [aut, cph, ths], Justin Slater [aut, cph, ths], Kayla Vanderkruk [aut, com, ctb]
Maintainer: Vinay Joshy <joshy at uoguelph.ca>
BugReports: https://github.com/vjoshy/ATQ_Surveillance_Package/issues
License: GPL (≥ 3)
URL: https://github.com/vjoshy/ATQ_Surveillance_Package
NeedsCompilation: no
Materials: README NEWS
CRAN checks: ATQ results

Documentation:

Reference manual: ATQ.pdf
Vignettes: ATQ_Guide

Downloads:

Package source: ATQ_0.2.0.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.