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netmhc2pan: Interface to 'NetMHCIIpan'
The field of immunology benefits from software that can
predict which peptide sequences trigger an immune response.
'NetMHCIIpan' is a such a tool: it predicts the
binding strength of a short peptide to a Major Histocompatibility
Complex class II (MHC-II) molecule.
'NetMHCIIpan' can be used from a web server at
<https://services.healthtech.dtu.dk/services/NetMHCIIpan-3.2/>
or from the command-line, using a local installation. This package
allows to call 'NetMHCIIpan' from R.
| Version: |
1.3.2 |
| Imports: |
devtools, dplyr, rappdirs, readr, seqinr, stringr, testit, tibble |
| Suggests: |
knitr, rmarkdown, testthat, spelling |
| Published: |
2023-11-08 |
| DOI: |
10.32614/CRAN.package.netmhc2pan |
| Author: |
Richèl J.C. Bilderbeek
 [aut, cre],
Lue Ping Zhao [ctb],
Byungkuk Min [ctb] |
| Maintainer: |
Richèl J.C. Bilderbeek <richel at richelbilderbeek.nl> |
| BugReports: |
https://github.com/richelbilderbeek/netmhc2pan/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/richelbilderbeek/netmhc2pan/ |
| NeedsCompilation: |
no |
| SystemRequirements: |
NetMHC2pan
(https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2) |
| Language: |
en-US |
| CRAN checks: |
netmhc2pan results |
Documentation:
Downloads:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=netmhc2pan
to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.