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tracerer: Tracer from R

'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'Tracer' (<https://github.com/beast-dev/tracer/>) is a GUI tool to parse and analyze the files generated by 'BEAST2'. This package provides a way to parse and analyze 'BEAST2' input files without active user input, but using R function calls instead.

Version: 2.2.3
Imports: jsonlite, Rcpp, testit
LinkingTo: Rcpp
Suggests: ape, ggplot2, hunspell, knitr, markdown, phangorn, rappdirs, rbenchmark, reshape2, rmarkdown, spelling, stringr, testthat (≥ 2.1.0)
Published: 2023-09-27
DOI: 10.32614/CRAN.package.tracerer
Author: Richèl J.C. Bilderbeek ORCID iD [aut, cre], Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), David Winter [rev] (David reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209)
Maintainer: Richèl J.C. Bilderbeek <richel at richelbilderbeek.nl>
BugReports: https://github.com/ropensci/tracerer/issues
License: GPL-3
URL: https://docs.ropensci.org/tracerer/ (website) https://github.com/ropensci/tracerer/
NeedsCompilation: yes
Language: en-US
Citation: tracerer citation info
In views: Phylogenetics
CRAN checks: tracerer results

Documentation:

Reference manual: tracerer.pdf
Vignettes: tracerer versus Tracer demo

Downloads:

Package source: tracerer_2.2.3.tar.gz
Windows binaries: r-devel: tracerer_2.2.3.zip, r-release: tracerer_2.2.3.zip, r-oldrel: tracerer_2.2.3.zip
macOS binaries: r-release (arm64): tracerer_2.2.3.tgz, r-oldrel (arm64): tracerer_2.2.3.tgz, r-release (x86_64): tracerer_2.2.3.tgz, r-oldrel (x86_64): tracerer_2.2.3.tgz
Old sources: tracerer archive

Reverse dependencies:

Reverse depends: babette
Reverse imports: nodeSub
Reverse suggests: beastier, mauricer, mcbette

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.