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Fits unimodal and multimodal gambin distributions to species-abundance distributions from ecological data, as in in Matthews et al. (2014) <doi:10.1111/ecog.00861>. 'gambin' is short for 'gamma-binomial'. The main function is fit_abundances(), which estimates the 'alpha' parameter(s) of the gambin distribution using maximum likelihood. Functions are also provided to generate the gambin distribution and for calculating likelihood statistics.
Version: | 2.5.0 |
Depends: | R (≥ 3.0.0) |
Imports: | stats, graphics, doParallel, gtools, foreach, parallel |
Suggests: | testthat, knitr, rmarkdown |
Published: | 2021-04-16 |
DOI: | 10.32614/CRAN.package.gambin |
Author: | Thomas Matthews [aut, cre], Michael Krabbe Borregaard [aut], Karl Ugland [aut], Colin Gillespie [aut] |
Maintainer: | Thomas Matthews <txm676 at gmail.com> |
BugReports: | https://github.com/txm676/gambin/issues |
License: | GPL-3 |
URL: | https://github.com/txm676/gambin/ |
NeedsCompilation: | no |
Citation: | gambin citation info |
Materials: | README NEWS |
In views: | Distributions |
CRAN checks: | gambin results |
Reference manual: | gambin.pdf |
Vignettes: |
Gambin overview |
Package source: | gambin_2.5.0.tar.gz |
Windows binaries: | r-devel: gambin_2.5.0.zip, r-release: gambin_2.5.0.zip, r-oldrel: gambin_2.5.0.zip |
macOS binaries: | r-release (arm64): gambin_2.5.0.tgz, r-oldrel (arm64): gambin_2.5.0.tgz, r-release (x86_64): gambin_2.5.0.tgz, r-oldrel (x86_64): gambin_2.5.0.tgz |
Old sources: | gambin archive |
Reverse suggests: | fitteR |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.