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gambin: Fit the Gambin Model to Species Abundance Distributions

Fits unimodal and multimodal gambin distributions to species-abundance distributions from ecological data, as in in Matthews et al. (2014) <doi:10.1111/ecog.00861>. 'gambin' is short for 'gamma-binomial'. The main function is fit_abundances(), which estimates the 'alpha' parameter(s) of the gambin distribution using maximum likelihood. Functions are also provided to generate the gambin distribution and for calculating likelihood statistics.

Version: 2.5.0
Depends: R (≥ 3.0.0)
Imports: stats, graphics, doParallel, gtools, foreach, parallel
Suggests: testthat, knitr, rmarkdown
Published: 2021-04-16
DOI: 10.32614/CRAN.package.gambin
Author: Thomas Matthews [aut, cre], Michael Krabbe Borregaard [aut], Karl Ugland [aut], Colin Gillespie [aut]
Maintainer: Thomas Matthews <txm676 at gmail.com>
BugReports: https://github.com/txm676/gambin/issues
License: GPL-3
URL: https://github.com/txm676/gambin/
NeedsCompilation: no
Citation: gambin citation info
Materials: README NEWS
In views: Distributions
CRAN checks: gambin results

Documentation:

Reference manual: gambin.pdf
Vignettes: Gambin overview

Downloads:

Package source: gambin_2.5.0.tar.gz
Windows binaries: r-devel: gambin_2.5.0.zip, r-release: gambin_2.5.0.zip, r-oldrel: gambin_2.5.0.zip
macOS binaries: r-release (arm64): gambin_2.5.0.tgz, r-oldrel (arm64): gambin_2.5.0.tgz, r-release (x86_64): gambin_2.5.0.tgz, r-oldrel (x86_64): gambin_2.5.0.tgz
Old sources: gambin archive

Reverse dependencies:

Reverse suggests: fitteR

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.