The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

readepi: Read Data from Relational Database Management Systems and Health Information Systems

Import Data from Relational Database Management Systems (RDBMS) and Health Information Systems ('HIS'). The current version of the package supports importing data from RDBMS including 'MS SQL', 'MySQL', 'PostGRESQL', and 'SQLite', as well as from two HIS platforms: 'DHIS2' and 'SORMAS'.

Version: 1.0.1
Depends: R (≥ 4.1.0)
Imports: checkmate, cli, DBI, dplyr, httr2, odbc, pool, purrr, RMySQL, RSQLite, tidyr
Suggests: cyclocomp, DiagrammeR, httptest, kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2025-10-01
DOI: 10.32614/CRAN.package.readepi (may not be active yet)
Author: Karim Mané ORCID iD [aut, cre, cph], Emmanuel Kabuga ORCID iD [ctb], Bubacarr Bah ORCID iD [ctb], Bankolé Ahadzie [ctb], Nuredin Mohammed [ctb], Abdoelnaser Degoot [ctb], Hugo Gruson ORCID iD [rev], Pratik Gupte ORCID iD [rev], Andree Valle-Campos ORCID iD [rev], London School of Hygiene and Tropical Medicine, LSHTM [cph], data.org [fnd]
Maintainer: Karim Mané <karim.mane at lshtm.ac.uk>
BugReports: https://github.com/epiverse-trace/readepi/issues
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/readepi/, https://github.com/epiverse-trace/readepi/, https://github.com/epiverse-trace/readepi
NeedsCompilation: no
SystemRequirements: odbc, libmariadbclient-dev
Citation: readepi citation info
Materials: README, NEWS
CRAN checks: readepi results

Documentation:

Reference manual: readepi.html , readepi.pdf
Vignettes: Package Design vignette for {readepi} (source, R code)
install_drivers (source, R code)
query_parameters (source, R code)
readepi: Reading data from health information systems (source, R code)

Downloads:

Package source: readepi_1.0.1.tar.gz
Windows binaries: r-devel: readepi_1.0.1.zip, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): readepi_1.0.1.tgz, r-oldrel (x86_64): readepi_1.0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=readepi to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.