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Utilities for single nucleotide polymorphism (SNP) based kinship analysis testing and evaluation. The 'skater' package contains functions for importing, parsing, and analyzing pedigree data, performing relationship degree inference, benchmarking relationship degree classification, and summarizing identity by descent (IBD) segment data. Package functions and methods are described in Turner et al. (2021) "skater: An R package for SNP-based Kinship Analysis, Testing, and Evaluation" <doi:10.1101/2021.07.21.453083>.
Version: | 0.1.2 |
Depends: | R (≥ 3.0.0) |
Imports: | magrittr, dplyr, tidyr, readr, purrr, kinship2, corrr, grDevices, tibble, rlang |
Suggests: | rmarkdown, markdown, knitr, testthat (≥ 3.0.0) |
Published: | 2023-01-31 |
DOI: | 10.32614/CRAN.package.skater |
Author: | Stephen Turner [aut, cre], Matthew Scholz [aut], VP Nagraj [aut], Signature Science, LLC. [cph] |
Maintainer: | Stephen Turner <vustephen at gmail.com> |
BugReports: | https://github.com/signaturescience/skater/issues |
License: | MIT + file LICENSE |
URL: | https://github.com/signaturescience/skater |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | skater results |
Reference manual: | skater.pdf |
Vignettes: |
Basic Usage |
Package source: | skater_0.1.2.tar.gz |
Windows binaries: | r-devel: skater_0.1.2.zip, r-release: skater_0.1.2.zip, r-oldrel: skater_0.1.2.zip |
macOS binaries: | r-release (arm64): skater_0.1.2.tgz, r-oldrel (arm64): skater_0.1.2.tgz, r-release (x86_64): skater_0.1.2.tgz, r-oldrel (x86_64): skater_0.1.2.tgz |
Old sources: | skater archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.