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Containerizes cytometry data and allows for S4 class structure to extend slots related to cell morphology, spatial coordinates, phenotype network information, and unique cellular labeling.
Version: | 0.99.0 |
Depends: | R (≥ 4.0), SingleCellExperiment, methods |
Imports: | SummarizedExperiment, S4Vectors, spatstat.geom, stats |
Suggests: | knitr, rmarkdown |
Published: | 2021-08-19 |
DOI: | 10.32614/CRAN.package.imcExperiment |
Author: | Anthony Colombo [aut, cre] |
Maintainer: | Anthony Colombo <anthonycolombo60 at gmail.com> |
License: | MIT + file LICENSE |
NeedsCompilation: | no |
Materials: | README |
CRAN checks: | imcExperiment results |
Reference manual: | imcExperiment.pdf |
Vignettes: |
imcExperiment: containerization of IMC data |
Package source: | imcExperiment_0.99.0.tar.gz |
Windows binaries: | r-devel: imcExperiment_0.99.0.zip, r-release: imcExperiment_0.99.0.zip, r-oldrel: imcExperiment_0.99.0.zip |
macOS binaries: | r-release (arm64): imcExperiment_0.99.0.tgz, r-oldrel (arm64): imcExperiment_0.99.0.tgz, r-release (x86_64): imcExperiment_0.99.0.tgz, r-oldrel (x86_64): imcExperiment_0.99.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.