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dpcR: Digital PCR Analysis

Analysis, visualisation and simulation of digital polymerase chain reaction (dPCR) (Burdukiewicz et al. (2016) <doi:10.1016/j.bdq.2016.06.004>). Supports data formats of commercial systems (Bio-Rad QX100 and QX200; Fluidigm BioMark) and other systems.

Version: 0.6
Depends: R (≥ 3.0.0), methods
Imports: binom, chipPCR, e1071, evd, dgof, multcomp, qpcR, pracma, rateratio.test, readxl, signal, shiny, spatstat.explore, spatstat.geom
Suggests: digest, DT, ggplot2, knitr, markdown, rhandsontable, rmarkdown, shinythemes, xtable
Published: 2025-06-18
DOI: 10.32614/CRAN.package.dpcR
Author: Michal Burdukiewicz ORCID iD [aut], Stefan Roediger ORCID iD [aut], Bart Jacobs [aut], Piotr Sobczyk [ctb], Andrej-Nikolai Spiess [cre, ctb]
Maintainer: Andrej-Nikolai Spiess <draspiess at gmail.com>
BugReports: https://github.com/michbur/dpcR/issues
License: GPL-3
URL: https://github.com/michbur/dpcR
NeedsCompilation: no
Materials: README ChangeLog
CRAN checks: dpcR results

Documentation:

Reference manual: dpcR.pdf
Vignettes: dpcR package - an overview (source, R code)

Downloads:

Package source: dpcR_0.6.tar.gz
Windows binaries: r-devel: dpcR_0.6.zip, r-release: not available, r-oldrel: dpcR_0.6.zip
macOS binaries: r-release (arm64): dpcR_0.6.tgz, r-oldrel (arm64): dpcR_0.6.tgz, r-release (x86_64): dpcR_0.6.tgz, r-oldrel (x86_64): dpcR_0.6.tgz
Old sources: dpcR archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.