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Facilitates the creation of intuitive figures to describe metabolomics data by utilizing Kyoto Encyclopedia of Genes and Genomes (KEGG) hierarchy data, and gathers functional orthology and gene data from the KEGG-REST API.
| Version: | 1.1.2 |
| Depends: | R (≥ 3.3.0) |
| Imports: | plyr, dplyr, stringr, httr, ggfortify, ggplot2, magrittr, tidyr, broom, FSA, rstatix, randomForest, caret |
| Suggests: | knitr, rmarkdown |
| Published: | 2024-03-06 |
| DOI: | 10.32614/CRAN.package.omu |
| Author: | Connor Tiffany [aut, cre] |
| Maintainer: | Connor Tiffany <tiffanyc1 at chop.edu> |
| BugReports: | https://github.com/connor-reid-tiffany/Omu/issues |
| License: | GPL-2 |
| URL: | https://github.com/connor-reid-tiffany/Omu, https://www.kegg.jp/kegg/rest/keggapi.html |
| NeedsCompilation: | no |
| Citation: | omu citation info |
| In views: | Omics |
| CRAN checks: | omu results |
| Reference manual: | omu.pdf |
| Vignettes: |
omu, a Metabolomics Analysis R Package |
| Package source: | omu_1.1.2.tar.gz |
| Windows binaries: | r-devel: omu_1.1.2.zip, r-release: omu_1.1.2.zip, r-oldrel: omu_1.1.2.zip |
| macOS binaries: | r-release (arm64): omu_1.1.2.tgz, r-oldrel (arm64): omu_1.1.2.tgz, r-release (x86_64): omu_1.1.2.tgz, r-oldrel (x86_64): omu_1.1.2.tgz |
| Old sources: | omu archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.