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PoweREST: A Bootstrap-Based Power Estimation Tool for Spatial
Transcriptomics
Power estimation and sample size calculation for 10X Visium Spatial Transcriptomics data to detect differential expressed genes between two conditions based on bootstrap resampling. See Shui et al. (2024) <doi:10.1101/2024.08.30.610564> for method details.
| Version: |
0.1.0 |
| Depends: |
R (≥ 2.10) |
| Imports: |
scam, Seurat, dplyr, plotly, resample, xgboost, magrittr, rayshader, ggplot2 |
| Suggests: |
patchwork, boot, knitr, rmarkdown, fields, rayrender, tidyr |
| Published: |
2024-09-09 |
| DOI: |
10.32614/CRAN.package.PoweREST |
| Author: |
Lan Shui  [aut,
cre] |
| Maintainer: |
Lan Shui <Lan.Shui at uth.tmc.edu> |
| License: |
MIT + file LICENSE |
| NeedsCompilation: |
no |
| CRAN checks: |
PoweREST results |
Documentation:
Downloads:
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https://CRAN.R-project.org/package=PoweREST
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.