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EBASE: Estuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism

Estimate ecosystem metabolism in a Bayesian framework for individual water quality monitoring stations with continuous dissolved oxygen time series. A mass balance equation is used that provides estimates of parameters for gross primary production, respiration, and gas exchange. Methods adapted from Grace et al. (2015) <doi:10.1002/lom3.10011> and Wanninkhof (2014) <doi:10.4319/lom.2014.12.351>. Details in Beck et al. (2024) <doi:10.1002/lom3.10620>.

Version: 1.1.0
Depends: R (≥ 3.5)
Imports: doParallel, dplyr, foreach, ggplot2 (≥ 3.4.0), lubridate, R2jags (≥ 0.6.1), rjags (≥ 4.10), tidyr, truncnorm, zoo
Suggests: testthat (≥ 3.0.0), knitr, rmarkdown, covr
Published: 2024-09-25
DOI: 10.32614/CRAN.package.EBASE
Author: Marcus Beck ORCID iD [aut, cre], Maria Herrmann [aut], Jill Arriola ORCID iD [aut], Raymond Najjar ORCID iD [aut]
Maintainer: Marcus Beck <mbeck at tbep.org>
BugReports: https://github.com/fawda123/EBASE/issues
License: CC0
URL: https://fawda123.github.io/EBASE/, https://github.com/fawda123/EBASE/
NeedsCompilation: no
SystemRequirements: JAGS 4.x.y (https://mcmc-jags.sourceforge.net)
Materials: README NEWS
CRAN checks: EBASE results

Documentation:

Reference manual: EBASE.pdf
Vignettes: EBASE overview (source, R code)

Downloads:

Package source: EBASE_1.1.0.tar.gz
Windows binaries: r-devel: EBASE_1.1.0.zip, r-release: EBASE_1.1.0.zip, r-oldrel: EBASE_1.1.0.zip
macOS binaries: r-release (arm64): EBASE_1.1.0.tgz, r-oldrel (arm64): EBASE_1.1.0.tgz, r-release (x86_64): EBASE_1.1.0.tgz, r-oldrel (x86_64): EBASE_1.1.0.tgz
Old sources: EBASE archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.