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DSAIDE: Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution)

Exploration of simulation models (apps) of various infectious disease transmission dynamics scenarios. The purpose of the package is to help individuals learn about infectious disease epidemiology (ecology/evolution) from a dynamical systems perspective. All apps include explanations of the underlying models and instructions on what to do with the models.

Version: 0.9.6
Depends: R (≥ 4.0.0), shiny (≥ 1.2)
Imports: adaptivetau, deSolve, dplyr, ggplot2, gridExtra, lhs, nloptr, plotly, rlang, stats, utils, XML
Suggests: covr, devtools, emoji, knitr, pkgdown, rmarkdown, roxygen2, testthat
Published: 2023-08-23
DOI: 10.32614/CRAN.package.DSAIDE
Author: Andreas Handel ORCID iD [aut, cre], Cody Dailey [ctb], Isaac Chun-Hai Fung [ctb], Ronald Galiwango [ctb], Salil Goyal [ctb], Spencer Hall [ctb], Ben Listyg [ctb], Brian McKay [ctb], John Rossow [ctb], Sina Solaimanpour [ctb], Alexis Vittengl [ctb], Henok Woldu [ctb]
Maintainer: Andreas Handel <andreas.handel at gmail.com>
BugReports: https://github.com/ahgroup/DSAIDE/issues
License: GPL-3
URL: https://ahgroup.github.io/DSAIDE/, https://github.com/ahgroup/DSAIDE/
NeedsCompilation: no
Citation: DSAIDE citation info
Materials: NEWS
In views: Epidemiology
CRAN checks: DSAIDE results

Documentation:

Reference manual: DSAIDE.pdf
Vignettes: DSAIDE Package Tutorial

Downloads:

Package source: DSAIDE_0.9.6.tar.gz
Windows binaries: r-devel: DSAIDE_0.9.6.zip, r-release: DSAIDE_0.9.6.zip, r-oldrel: DSAIDE_0.9.6.zip
macOS binaries: r-release (arm64): DSAIDE_0.9.6.tgz, r-oldrel (arm64): DSAIDE_0.9.6.tgz, r-release (x86_64): DSAIDE_0.9.6.tgz, r-oldrel (x86_64): DSAIDE_0.9.6.tgz
Old sources: DSAIDE archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=DSAIDE to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.