ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier

Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>.

Version:	1.7.3
Depends:	R (≥ 3.5.0)
Imports:	ALDEx2, aplot, DESeq2, dplyr, edgeR, GGally, ggplot2, grid, ggh4x, lefser, limma, Maaslin2, metagenomeSeq, MicrobiomeStat, readr, SummarizedExperiment, tibble, tidyr, ggprism, patchwork, circlize
Suggests:	Biobase, KEGGREST, ComplexHeatmap, ggplotify, BiocGenerics, magrittr, utils, knitr, rmarkdown
Published:	2023-11-08
DOI:	10.32614/CRAN.package.ggpicrust2
Author:	Chen Yang [aut, cre], Liangliang Zhang [aut]
Maintainer:	Chen Yang <cafferychen7850 at gmail.com>
BugReports:	https://github.com/cafferychen777/ggpicrust2/issues
License:	MIT + file LICENSE
URL:	https://github.com/cafferychen777/ggpicrust2
NeedsCompilation:	no
Materials:	README NEWS
CRAN checks:	ggpicrust2 results [issues need fixing before 2024-11-25]

Documentation:

Reference manual:	ggpicrust2.pdf
Vignettes:	ggpicrust2 vigenett

Downloads:

Package source:	ggpicrust2_1.7.3.tar.gz
Windows binaries:	r-devel: ggpicrust2_1.7.3.zip, r-release: ggpicrust2_1.7.3.zip, r-oldrel: ggpicrust2_1.7.3.zip
macOS binaries:	r-release (arm64): ggpicrust2_1.7.3.tgz, r-oldrel (arm64): ggpicrust2_1.7.3.tgz, r-release (x86_64): ggpicrust2_1.7.3.tgz, r-oldrel (x86_64): ggpicrust2_1.7.3.tgz
Old sources:	ggpicrust2 archive

Linking:

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