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Implement in 'R' interactive Circos-like visualizations of genomic data, to map information such as genetic variants, genomic fusions and aberrations to a circular genome, as proposed by the 'JavaScript' library 'BioCircos.js', based on the 'JQuery' and 'D3' technologies. The output is by default displayed in stand-alone HTML documents or in the 'RStudio' viewer pane. Moreover it can be integrated in 'R Markdown' documents and 'Shiny' applications.
| Version: | 0.3.4 |
| Depends: | R (≥ 3.1.0) |
| Imports: | RColorBrewer, htmlwidgets, jsonlite, plyr, grDevices |
| Suggests: | knitr, rmarkdown |
| Published: | 2019-03-19 |
| DOI: | 10.32614/CRAN.package.BioCircos |
| Author: | Loan Vulliard [trl, cre], Xiaowei Chen [aut], Ya Cui [aut] |
| Maintainer: | Loan Vulliard <lvulliard at cemm.at> |
| License: | GPL-2 | file LICENSE |
| URL: | https://github.com/lvulliard/BioCircos.R |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | BioCircos results |
| Reference manual: | BioCircos.pdf |
| Vignettes: |
BioCircos: Generating circular multi-track plots |
| Package source: | BioCircos_0.3.4.tar.gz |
| Windows binaries: | r-devel: BioCircos_0.3.4.zip, r-release: BioCircos_0.3.4.zip, r-oldrel: BioCircos_0.3.4.zip |
| macOS binaries: | r-release (arm64): BioCircos_0.3.4.tgz, r-oldrel (arm64): BioCircos_0.3.4.tgz, r-release (x86_64): BioCircos_0.3.4.tgz, r-oldrel (x86_64): BioCircos_0.3.4.tgz |
| Old sources: | BioCircos archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.