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statgenGxE: Genotype by Environment (GxE) Analysis

Analysis of multi environment data of plant breeding experiments following the analyses described in Malosetti, Ribaut, and van Eeuwijk (2013), <doi:10.3389/fphys.2013.00044>. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris. Some functions have been created to be used in conjunction with the R package 'asreml' for the 'ASReml' software, which can be obtained upon purchase from 'VSN' international (<https://vsni.co.uk/software/asreml-r/>).

Version: 1.0.9
Depends: R (≥ 3.3)
Imports: emmeans, ggplot2 (≥ 3.3.0), gridExtra, knitr, lme4, methods, rlang, statgenSTA (≥ 1.0.6), xtable
Suggests: asreml (≥ 3.0), rmarkdown, testthat
Published: 2024-09-18
DOI: 10.32614/CRAN.package.statgenGxE
Author: Bart-Jan van Rossum [aut, cre], Fred van Eeuwijk ORCID iD [ctb], Martin Boer [ctb], Marcos Malosetti ORCID iD [ctb], Daniela Bustos-Korts ORCID iD [ctb], Emilie J Millet ORCID iD [ctb], Joao Paulo ORCID iD [ctb], Maikel Verouden ORCID iD [ctb], Willem Kruijer ORCID iD [ctb], Ron Wehrens ORCID iD [ctb], Choazhi Zheng ORCID iD [ctb]
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl>
BugReports: https://github.com/Biometris/statgenGxE/issues
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: https://biometris.github.io/statgenGxE/index.html, https://github.com/Biometris/statgenGxE/
NeedsCompilation: no
SystemRequirements: pdflatex
Materials: README NEWS
In views: Agriculture
CRAN checks: statgenGxE results

Documentation:

Reference manual: statgenGxE.pdf
Vignettes: Genotype by Environment analysis using statgenGxE (source, R code)

Downloads:

Package source: statgenGxE_1.0.9.tar.gz
Windows binaries: r-devel: statgenGxE_1.0.9.zip, r-release: statgenGxE_1.0.9.zip, r-oldrel: statgenGxE_1.0.9.zip
macOS binaries: r-release (arm64): statgenGxE_1.0.9.tgz, r-oldrel (arm64): statgenGxE_1.0.9.tgz, r-release (x86_64): statgenGxE_1.0.9.tgz, r-oldrel (x86_64): statgenGxE_1.0.9.tgz
Old sources: statgenGxE archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.