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ecocomDP: Tools to Create, Use, and Convert ecocomDP Data

Work with the Ecological Community Data Design Pattern. 'ecocomDP' is a flexible data model for harmonizing ecological community surveys, in a research question agnostic format, from source data published across repositories, and with methods that keep the derived data up-to-date as the underlying sources change. Described in O'Brien et al. (2021), <doi:10.1016/j.ecoinf.2021.101374>.

Version: 1.3.2
Depends: R (≥ 3.4.0)
Imports: RColorBrewer, data.table, dplyr, EML (≥ 2.0.5), emld (≥ 0.5.1), geosphere, ggplot2, httr, lubridate, magrittr, methods, neonUtilities (≥ 2.1.1), rlang, rmarkdown, stats, stringr, tidyr, tools, utils, uuid, xml2, neonOS
Suggests: knitr, mime, reader, ritis, taxize, testthat, worrms, ggrepel, usmap (≥ 0.6.1), sf (≥ 1.0.9), maps
Published: 2024-08-16
DOI: 10.32614/CRAN.package.ecocomDP
Author: Colin Smith ORCID iD [aut, cre, cph], Eric Sokol ORCID iD [aut], Margaret O'Brien ORCID iD [aut], Matt Bitters [ctb], Melissa Chen [ctb], Savannah Gonzales [ctb], Matt Helmus [ctb], Brendan Hobart [ctb], Ruvi Jaimes [ctb], Lara Janson [ctb], Marta Jarzyna [ctb], Michael Just [ctb], Daijiang Li [ctb], Wynne Moss [ctb], Kari Norman [ctb], Stephanie Parker [ctb], Rafael Rangel ORCID iD [ctb], Natalie Robinson [ctb], Thilina Surasinghe [ctb], Kyle Zollo-Venecek ORCID iD [ctb]
Maintainer: Colin Smith <colin.smith at wisc.edu>
BugReports: https://github.com/EDIorg/ecocomDP/issues
License: MIT + file LICENSE
URL: https://github.com/EDIorg/ecocomDP
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: ecocomDP results

Documentation:

Reference manual: ecocomDP.pdf
Vignettes: Convert ecocomDP Data to Another Model Format (source, R code)
Create ecocomDP Data (source, R code)
ecocomDP Model Overview (source, R code)
Shared Practices for Creating ecocomDP Data (source, R code)
Use ecocomDP Data (source, R code)

Downloads:

Package source: ecocomDP_1.3.2.tar.gz
Windows binaries: r-devel: ecocomDP_1.3.2.zip, r-release: ecocomDP_1.3.2.zip, r-oldrel: ecocomDP_1.3.2.zip
macOS binaries: r-release (arm64): ecocomDP_1.3.2.tgz, r-oldrel (arm64): ecocomDP_1.3.2.tgz, r-release (x86_64): ecocomDP_1.3.2.tgz, r-oldrel (x86_64): ecocomDP_1.3.2.tgz
Old sources: ecocomDP archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ecocomDP to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.