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BGmisc: An R Package for Extended Behavior Genetics Analysis

Provides functions for behavior genetics analysis, including variance component model identification [Hunter et al. (2021) <doi:10.1007/s10519-021-10055-x>], calculation of relatedness coefficients using path-tracing methods [Wright (1922) <doi:10.1086/279872>; McArdle & McDonald (1984) <doi:10.1111/j.2044-8317.1984.tb00802.x>], inference of relatedness, pedigree conversion, and simulation of multi-generational family data [Lyu et al. (2024) <doi:10.1101/2024.12.19.629449>]. For a full overview, see Garrison et al. (2025) <doi:10.21105/joss.06203>.

Version: 1.3.3
Depends: R (≥ 3.5.0)
Imports: data.table, igraph, kinship2, Matrix, stats, stringr
Suggests: dplyr, EasyMx, knitr, OpenMx, rmarkdown, testthat (≥ 3.0.0), tidyverse
Published: 2025-02-19
DOI: 10.32614/CRAN.package.BGmisc
Author: S. Mason Garrison ORCID iD [aut, cre], Michael D. Hunter ORCID iD [aut], Xuanyu Lyu ORCID iD [aut], Rachel N. Good [ctb], Jonathan D. Trattner ORCID iD [aut] (https://www.jdtrat.com/), S. Alexandra Burt ORCID iD [aut]
Maintainer: S. Mason Garrison <garrissm at wfu.edu>
BugReports: https://github.com/R-Computing-Lab/BGmisc/issues
License: GPL-3
URL: https://github.com/R-Computing-Lab/BGmisc/, https://r-computing-lab.github.io/BGmisc/
NeedsCompilation: no
Language: en-US
Citation: BGmisc citation info
Materials: README NEWS
CRAN checks: BGmisc results

Documentation:

Reference manual: BGmisc.pdf
Vignettes: Relatedness Coefficients (source, R code)
modelingandrelatedness (source, R code)
Network (source, R code)
Pedigree (source, R code)
Validation (source, R code)

Downloads:

Package source: BGmisc_1.3.3.tar.gz
Windows binaries: r-devel: BGmisc_1.3.3.zip, r-release: BGmisc_1.3.3.zip, r-oldrel: BGmisc_1.3.3.zip
macOS binaries: r-devel (arm64): BGmisc_1.3.3.tgz, r-release (arm64): BGmisc_1.3.3.tgz, r-oldrel (arm64): BGmisc_1.3.3.tgz, r-devel (x86_64): BGmisc_1.3.3.tgz, r-release (x86_64): BGmisc_1.3.3.tgz, r-oldrel (x86_64): BGmisc_1.3.3.tgz
Old sources: BGmisc archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.