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The goal of 'LCMSQA' is to make it easy to check the quality of liquid chromatograph/mass spectrometry (LC/MS) experiments using a 'shiny' application. This package provides interactive data visualizations for quality control (QC) samples, including total ion current chromatogram (TIC), base peak chromatogram (BPC), mass spectrum, extracted ion chromatogram (XIC), and feature detection results from internal standards or known metabolites.
| Version: | 1.0.2 |
| Depends: | R (≥ 4.0.0) |
| Imports: | bsplus, data.table, DT, ggplot2, methods, plotly, shiny, shinycssloaders, shinyjs, shinyWidgets |
| Suggests: | BiocManager, xcms, MSnbase, knitr, rmarkdown |
| Published: | 2024-01-12 |
| DOI: | 10.32614/CRAN.package.LCMSQA |
| Author: | Jaehyun Joo [aut, cre], Blanca Himes [aut] |
| Maintainer: | Jaehyun Joo <jaehyunjoo at outlook.com> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| In views: | ChemPhys |
| CRAN checks: | LCMSQA results |
| Reference manual: | LCMSQA.pdf |
| Vignettes: |
Introduction to LCMSQA |
| Package source: | LCMSQA_1.0.2.tar.gz |
| Windows binaries: | r-devel: LCMSQA_1.0.2.zip, r-release: LCMSQA_1.0.2.zip, r-oldrel: LCMSQA_1.0.2.zip |
| macOS binaries: | r-release (arm64): LCMSQA_1.0.2.tgz, r-oldrel (arm64): LCMSQA_1.0.2.tgz, r-release (x86_64): LCMSQA_1.0.2.tgz, r-oldrel (x86_64): LCMSQA_1.0.2.tgz |
| Old sources: | LCMSQA archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.