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ipmr: Integral Projection Models

Flexibly implements Integral Projection Models using a mathematical(ish) syntax. This package will not help with the vital rate modeling process, but will help convert those regression models into an IPM. 'ipmr' handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.

Version: 0.0.7
Depends: R (≥ 3.4)
Imports: graphics, grDevices, magrittr, methods, purrr (≥ 0.3.0), rlang (≥ 0.3.0), stats, utils, Rcpp
LinkingTo: Rcpp
Suggests: covr, knitr, lme4, mvtnorm, rmarkdown, roxygen2, spelling, testthat, tools
Published: 2023-02-16
DOI: 10.32614/CRAN.package.ipmr
Author: Sam Levin ORCID iD [aut, cre], Aldo Compagnoni [aut], Dylan Childs [aut], Sanne Evers [aut], Roberto Salguero-Gomez [aut], Tiffany Knight [aut], Eric Scott [ctb]
Maintainer: Sam Levin <levisc8 at gmail.com>
BugReports: https://github.com/padrinoDB/ipmr/issues
License: MIT + file LICENSE
URL: https://padrinoDB.github.io/ipmr/, https://github.com/padrinoDB/ipmr
NeedsCompilation: yes
Language: en-US
Citation: ipmr citation info
Materials: NEWS
CRAN checks: ipmr results

Documentation:

Reference manual: ipmr.pdf
Vignettes: Age-Size IPMs
Density Dependent IPMs
General IPMs
Index Notation in ipmr
Introduction to ipmr
proto_ipm Data Structure

Downloads:

Package source: ipmr_0.0.7.tar.gz
Windows binaries: r-devel: ipmr_0.0.7.zip, r-release: ipmr_0.0.7.zip, r-oldrel: ipmr_0.0.7.zip
macOS binaries: r-release (arm64): ipmr_0.0.7.tgz, r-oldrel (arm64): ipmr_0.0.7.tgz, r-release (x86_64): ipmr_0.0.7.tgz, r-oldrel (x86_64): ipmr_0.0.7.tgz
Old sources: ipmr archive

Reverse dependencies:

Reverse depends: Rpadrino

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ipmr to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.