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simcross: Simulate Experimental Crosses

Simulate and plot general experimental crosses. The focus is on simulating genotypes with an aim towards flexibility rather than speed. Meiosis is simulated following the Stahl model, in which chiasma locations are the superposition of two processes: a proportion p coming from a process exhibiting no interference, and the remainder coming from a process following the chi-square model.

Version: 0.6
Depends: R (≥ 3.1.0)
Imports: graphics, stats, Rcpp (≥ 0.12.17)
LinkingTo: Rcpp
Suggests: qtl, knitr, rmarkdown, testthat, devtools, roxygen2
Published: 2023-11-29
DOI: 10.32614/CRAN.package.simcross
Author: Karl W Broman ORCID iD [aut, cre]
Maintainer: Karl W Broman <broman at wisc.edu>
BugReports: https://github.com/kbroman/simcross/issues
License: GPL-3
URL: https://kbroman.org/simcross/, https://github.com/kbroman/simcross
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: simcross results

Documentation:

Reference manual: simcross.pdf
Vignettes: R/simcross User Guide

Downloads:

Package source: simcross_0.6.tar.gz
Windows binaries: r-devel: simcross_0.6.zip, r-release: simcross_0.6.zip, r-oldrel: simcross_0.6.zip
macOS binaries: r-release (arm64): simcross_0.6.tgz, r-oldrel (arm64): simcross_0.6.tgz, r-release (x86_64): simcross_0.6.tgz, r-oldrel (x86_64): simcross_0.6.tgz
Old sources: simcross archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.